Ss1.1-rlnt27c_o1.5
|
CAGAGCTGATTCCTTTCCTTTGTCCTGTGTGGCTTTCCTTTGAGATGGAAGGGCAGAAAA
ATGAAGGCTGGGTCATAACCATAAAATATATTTTATGGCTGGAATGGGCATGGAAACCTT
CCAACTCAGTTTCCCCAGACACCCCTCTTCCCTTTTTAAAGAAATGAGGAACTGGAGGTT
CAGTGCCCTGTGTCTTAGTTTGTACTGCAGTTTTGTTTTTTTAATCCTAGGGTCAGAATG
AATAGTCTTTAAGTTACACACAAAATTTGCTCACGAGGAGGATGCCCAAATGATTTAGGA
GACTTTTTAACAGCTTTTTCTTCCTGCTTGTTTTCAGTTAAGAATTAAAATGTGCCCAGA
TCCCCGAAACGCACACCCAGACAGGGAGAAACCCCACGTGAGAGTAATGTGAATGGGAGT
CCTGGGAAGTGATGTCTTGTGATTGGAAAAGCCGTCATGTCAACTATGAGAGATTAAAAC
CCAGCCAGCCCTTCATTTTTCTTTGCAAATCAAGAACTCCTTAGGGACTTAAGTTTTTCT
TCACCAGCCTTTTCCTCATCAACCCACAGATTGGTCGCTTGGCCTGGATTTTAGAAGTGC
GTATAGCTGCTTATAAATTCATGTGACTCAATGAGAAACCAGGTTTGCTTTTTTTTTTTT
TTAAAGGGTTGGGATTCCAGGAAAAGAGGCTGCTGACTAGCCTTTCCTCCAAAGATAATC
CAGAAATGCATCTTTACATGCTTGTTATCCACAGTAGCTTTTTAAAGATTGTTCTACAGA
AAAGAGACGTGTGATACCTACAGAAATCGCCAGTTTAGAAACTGGTGAAATTGGATGAAG
GAAAAGTGCCAAGACTTGAATGTGCACATTGTTCTATGTATTATCAGTATTTTTTTTTTC
CTAAGAAAAATA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CAGAGCTGATTCCTTTCCTTTGTCCTGTGTGGCTTTCCTTTGAGATGGAAGGGCAGAAAA
ATGAAGGCTGGGTCATAACCATAAAATATATTTTATGGCTGGAATGGGCATGGAAACCTT
CCAACTCAGTTTCCCCAGACACCCCTCTTCCCTTTTTAAAGAAATGAGGAACTGGAGGTT
CAGTGCCCTGTGTCTTAGTTTGTACTGCAGTTTTGTTTTTTTAATCCTAGGGTCAGAATG
AATAGTCTTTAAGTTACACACAAAATTTGCTCACGAGGAGGATGCCCAAATGATTTAGGA
GACTTTTTAACAGCTTTTTCTTCCTGCTTGTTTTCAGTTAAGAATTAAAATGTGCCCAGA
TCCCCGAAACGCACACCCAGACAGGGAGAAACCCCACGTGAGAGTAATGTGAATGGGAGT
CCTGGGAAGTGATGTCTTGTGATTGGAAAAGCCGTCATGTCAACTATGAGAGATTAAAAC
CCAGCCAGCCCTTCATTTTTCTTTGCAAATCAAGAACTCCTTAGGGACTTAAGTTTTTCT
TCACCAGCCTTTTCCTCATCAACCCACAGATTGGTCGCTTGGCCTGGATTTTAGAAGTGC
GTATAGCTGCTTATAAATTCATGTGACTCAATGAGAAACCAGGTTTGCTTTTTTTTTTTT
TTAAAGGGTTGGGATTCCAGGAAAAGAGGCTGCTGACTAGCCTTTCCTCCAAAGATAATC
CAGAAATGCATCTTTACATGCTTGTTATCCACAGTAGCTTTTTAAAGATTGTTCTACAGA
AAAGAGACGTGTGATACCTACAGAAATCGCCAGTTTAGAAACTGGTGAAATTGGATGAAG
GAAAAGTGCCAAGACTTGAATGTGCACATTGTTCTATGTATTATCAGTATTTTTTTTTTC
CTAAGAAAAATA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
48-637, gnl|bosTau2|chr8 (11577117-11577711) |
|
48-637, gnl|canFam2|chr21 (26580054-26578895) |
|
48-637, gnl|dasNov1|scaffold_82682 (2489-1307) |
|
48-637, gnl|echTel1|scaffold_319597 (81843-80940) |
|
48-637, gnl|hg17|chr11 (74229267-74230541) |
|
48-637, gnl|Hg17|chr11 (74229377-74229961) |
|
48-637, gnl|loxAfr1|scaffold_16716 (48178-46925) |
|
48-637, gnl|mm7|chr7 (95952682-95951621) |
|
48-637, gnl|panTro1|chr9 (75516951-75518219) |
|
48-637, gnl|rheMac2|chr14 (73011045-73012302) |
|
48-637, gnl|rn3|chr1 (157364143-157363131) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
48-637, gnl|bosTau2|chr8 (11577117-11577711) |
|
48-637, gnl|canFam2|chr21 (26580054-26578895) |
|
48-637, gnl|dasNov1|scaffold_82682 (2489-1307) |
|
48-637, gnl|echTel1|scaffold_319597 (81843-80940) |
|
48-637, gnl|hg17|chr11 (74229267-74230541) |
|
48-637, gnl|Hg17|chr11 (74229377-74229961) |
|
48-637, gnl|loxAfr1|scaffold_16716 (48178-46925) |
|
48-637, gnl|mm7|chr7 (95952682-95951621) |
|
48-637, gnl|panTro1|chr9 (75516951-75518219) |
|
48-637, gnl|rheMac2|chr14 (73011045-73012302) |
|
48-637, gnl|rn3|chr1 (157364143-157363131) |
|
aor (0.195274) |
|
lnt (0.142308) |
|
nca (0.136874) |
|
aor (0.195274) |
|
lnt (0.142308) |
|
nca (0.136874) |
