Ss1.1-rlnt27c_p21.5
|
CCTCCCTGTACTTGGCCGGCAAAGTGGAGGAGCAGCACCTGCGCACTCGTGACATCATCA
ACGTTTCCAACAGGTACTTTCACCCGGGCAGCGAGCCTCTGGAGCTGGATTCCCGCTTCT
GGGAGCTGCGGGATAGCATCGTGCAGTGCGAGCTGCTGGTGCTCCGAGTTCTGCGTTTCC
AGGTCTCCTTCCAGCACCCACACAAGTACCTGCTCCACTACCTGCTGTCGCTCAAGAACT
GGCTGAACCGTCACAGCTGGCAGCGGACCCCCGTCTCCGTCACTGCCTGGGCTCTGCTGC
GGGACAGCTACCACGGCGGCCTGTGCCTGCGCTTCCGGGCTCAGCACATCGCCGCAGCAG
TGCTGTACCTGGCCCTGCAGGCCTACGGGGTCGAGGTGCCTGCCGAGGCCGAGGCCGAGA
AGCCGTGGTGGCAGGTGTTTAGTGAAGACCTTACCAAGCCAGTCATTGATAATATTGTGT
CTGATCTCATTCAGATTTATACCATGGACACAGAGATCCCCTAAGGCCTGGCCCAGGCCT
GCCCAAAGAAGCCCGGGACGCTCGGCTGCCTGGGGACGGCACCGCCACGGGGCCGCGAAG
TGCCGGCCCCAGAGGACCCGCGGGGAGGGCTGGTTTGGTGCTGCTGGAGACGGGCTGGTG
AAGGCGATGATGCGCGCGCTCTGACTGTCCCCGGCCGGACGGTGACGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCTCCCTGTACTTGGCCGGCAAAGTGGAGGAGCAGCACCTGCGCACTCGTGACATCATCA
ACGTTTCCAACAGGTACTTTCACCCGGGCAGCGAGCCTCTGGAGCTGGATTCCCGCTTCT
GGGAGCTGCGGGATAGCATCGTGCAGTGCGAGCTGCTGGTGCTCCGAGTTCTGCGTTTCC
AGGTCTCCTTCCAGCACCCACACAAGTACCTGCTCCACTACCTGCTGTCGCTCAAGAACT
GGCTGAACCGTCACAGCTGGCAGCGGACCCCCGTCTCCGTCACTGCCTGGGCTCTGCTGC
GGGACAGCTACCACGGCGGCCTGTGCCTGCGCTTCCGGGCTCAGCACATCGCCGCAGCAG
TGCTGTACCTGGCCCTGCAGGCCTACGGGGTCGAGGTGCCTGCCGAGGCCGAGGCCGAGA
AGCCGTGGTGGCAGGTGTTTAGTGAAGACCTTACCAAGCCAGTCATTGATAATATTGTGT
CTGATCTCATTCAGATTTATACCATGGACACAGAGATCCCCTAAGGCCTGGCCCAGGCCT
GCCCAAAGAAGCCCGGGACGCTCGGCTGCCTGGGGACGGCACCGCCACGGGGCCGCGAAG
TGCCGGCCCCAGAGGACCCGCGGGGAGGGCTGGTTTGGTGCTGCTGGAGACGGGCTGGTG
AAGGCGATGATGCGCGCGCTCTGACTGTCCCCGGCCGGACGGTGACGG
|
|
gi|37589903|gb|AAH01909.2| |
Protein identifier
|
gi|37589903|gb|AAH01909.2| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
72-212, gnl|bosTau2|chrX (13678081-13678222) |
|
72-212, gnl|canFam2|chrX (124458879-124458977) |
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72-212, gnl|danRer3|chr23 (22376912-22377011) |
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72-212, gnl|dasNov1|scaffold_220908 (271-369) |
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72-212, gnl|echTel1|scaffold_43398 (1480-1380) |
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72-212, gnl|fr1|chrUn (211276271-211276370) |
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72-212, gnl|hg17|chr5 (172122439-172122538) |
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72-212, gnl|Hg17|chrX (152380986-152380845) |
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72-212, gnl|mm7|chr11 (78832804-78832903) |
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72-212, gnl|Mm7|chrX (68967343-68967202) |
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72-212, gnl|monDom2|scaffold_7 (82645463-82645562) |
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72-212, gnl|oryCun1|scaffold_174812 (37951-37853) |
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72-212, gnl|panTro1|chr4 (179446810-179446909) |
|
72-212, gnl|rheMac2|chr1 (170282108-170282204) |
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72-212, gnl|rn3|chr10 (64879284-64879383) |
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72-212, gnl|tetNig1|chrUn_random (128891963-128892063) |
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72-212, gnl|xenTro1|scaffold_82 (1046067-1046162) |
| |
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367-610, gnl|bosTau2|chr18 (43362591-43362346) |
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367-610, gnl|Mm7|chr11 (78832642-78832401) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
72-212, gnl|bosTau2|chrX (13678081-13678222) |
|
72-212, gnl|canFam2|chrX (124458879-124458977) |
|
72-212, gnl|danRer3|chr23 (22376912-22377011) |
|
72-212, gnl|dasNov1|scaffold_220908 (271-369) |
|
72-212, gnl|echTel1|scaffold_43398 (1480-1380) |
|
72-212, gnl|fr1|chrUn (211276271-211276370) |
|
72-212, gnl|hg17|chr5 (172122439-172122538) |
|
72-212, gnl|Hg17|chrX (152380986-152380845) |
|
72-212, gnl|mm7|chr11 (78832804-78832903) |
|
72-212, gnl|Mm7|chrX (68967343-68967202) |
|
72-212, gnl|monDom2|scaffold_7 (82645463-82645562) |
|
72-212, gnl|oryCun1|scaffold_174812 (37951-37853) |
|
72-212, gnl|panTro1|chr4 (179446810-179446909) |
|
72-212, gnl|rheMac2|chr1 (170282108-170282204) |
|
72-212, gnl|rn3|chr10 (64879284-64879383) |
|
72-212, gnl|tetNig1|chrUn_random (128891963-128892063) |
|
72-212, gnl|xenTro1|scaffold_82 (1046067-1046162) |
| |
|
367-610, gnl|bosTau2|chr18 (43362591-43362346) |
|
367-610, gnl|Mm7|chr11 (78832642-78832401) |
|
cov (0.264306) |
|
fcc (0.197785) |
|
lnt (0.142308) |
|
cov (0.264306) |
|
fcc (0.197785) |
|
lnt (0.142308) |
