Ss1.1-rlnt29c_m16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAAGAGCTCCGGTCGGTGGTGGCTGACAAGATTGCCAAGTATGCGGTGCCCGACCAGGT TCTGGTGGTGAAACGTCTGCCAAAAACTAGGTCTGGAAAAGTCATGCGGCGGCTCCTGAG GAAGATTGTCACTGGCCAAGCTCAGGACCTGGGGGACACCACCACCCTGGAGGACCCCAG CGTTATCTCGGAGATACTCAGTGCCTACCAGGAGTACAAGGACAAGAGAGGGGCTTTGTG ACGATGCTGCCCAGGCCCCCACCAGCCCCAAATGGCTTGTTCTTGCCATCCCTACAGAAC CTGCGCTGCCCTCATGCAAAGACCTGAGTTCCCGCCCACCCTCCACTTGTGAACCCACGA CAGGTCCTCAGACAGGGAGAGCTTCCTCCCTCTTGCCCTGAATCTGCCACCTGGTGCAAA GTCACTGTCACCTCCATTCTCATGTCCTTTCCTGACAACACAGGTGACTGGGAACAAGAA GCGGGCATGCTTTTTCCAGTGTTTCTAGAAATGAAAGGCAAAAATTTTATTTTTATACTT TTATATTTTAGAAGAAAAATGGTGTAGACACACAGGTGCAATGTGTGGATTTATTTGTAC ACACTCTTTATAAGTTATGGCAAGTTCCTTTTTTGCCTCTACCTGTGGGGAGGTGTGGAG GGTTGGAGGGTCTGTTCTGGGTATTGTTTGGCATATTTGAAATCTGAATTGGAAATGTTT GTACTGCTGTCTGAACTCAGCTATCTTGAAACCTTTCATGCCTGCAGCACCTGTTTTTGG TGCGTGTTTCTACTTCCCCTGGTTTCTGTGTAATGAACCCTAACTCCTAAAAGCAGCTGC GTTGTGGCACAGTGGAAATGAATCTGACTAGGATCCATGAAGATGTGGGTTCAATCCCTG TCCTTGCTTAGTGGGTCAGGAATCTGGCGTTGCCATGGGCTGTGGTGTAGGTTGCAGATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAAGAGCTCCGGTCGGTGGTGGCTGACAAGATTGCCAAGTATGCGGTGCCCGACCAGGT TCTGGTGGTGAAACGTCTGCCAAAAACTAGGTCTGGAAAAGTCATGCGGCGGCTCCTGAG GAAGATTGTCACTGGCCAAGCTCAGGACCTGGGGGACACCACCACCCTGGAGGACCCCAG CGTTATCTCGGAGATACTCAGTGCCTACCAGGAGTACAAGGACAAGAGAGGGGCTTTGTG ACGATGCTGCCCAGGCCCCCACCAGCCCCAAATGGCTTGTTCTTGCCATCCCTACAGAAC CTGCGCTGCCCTCATGCAAAGACCTGAGTTCCCGCCCACCCTCCACTTGTGAACCCACGA CAGGTCCTCAGACAGGGAGAGCTTCCTCCCTCTTGCCCTGAATCTGCCACCTGGTGCAAA GTCACTGTCACCTCCATTCTCATGTCCTTTCCTGACAACACAGGTGACTGGGAACAAGAA GCGGGCATGCTTTTTCCAGTGTTTCTAGAAATGAAAGGCAAAAATTTTATTTTTATACTT TTATATTTTAGAAGAAAAATGGTGTAGACACACAGGTGCAATGTGTGGATTTATTTGTAC ACACTCTTTATAAGTTATGGCAAGTTCCTTTTTTGCCTCTACCTGTGGGGAGGTGTGGAG GGTTGGAGGGTCTGTTCTGGGTATTGTTTGGCATATTTGAAATCTGAATTGGAAATGTTT GTACTGCTGTCTGAACTCAGCTATCTTGAAACCTTTCATGCCTGCAGCACCTGTTTTTGG TGCGTGTTTCTACTTCCCCTGGTTTCTGTGTAATGAACCCTAACTCCTAAAAGCAGCTGC GTTGTGGCACAGTGGAAATGAATCTGACTAGGATCCATGAAGATGTGGGTTCAATCCCTG TCCTTGCTTAGTGGGTCAGGAATCTGGCGTTGCCATGGGCTGTGGTGTAGGTTGCAGATG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 64-231, gnl|bosTau2|chr13 (28112295-28112462) | |
| 64-231, gnl|canFam2|chr23 (4194032-4194246) | |
| 64-231, gnl|danRer3|chr17 (1704714-1704903) | |
| 64-231, gnl|dasNov1|scaffold_109662 (1751-1544) | |
| 64-231, gnl|echTel1|scaffold_323443 (47603-47434) | |
| 64-231, gnl|fr1|chrUn (139349634-139349460) | |
| 64-231, gnl|hg17|chr20 (24936412-24936626) | |
| 64-231, gnl|Hg17|chr20 (24936578-24936411) | |
| 64-231, gnl|mm7|chr2 (150360484-150360691) | |
| 64-231, gnl|Mm7|chr2 (150360650-150360483) | |
| 64-231, gnl|monDom2|scaffold_1 (62137431-62137651) | |
| 64-231, gnl|oryCun1|scaffold_172951 (54422-54213) | |
| 64-231, gnl|panTro1|chr21 (25313980-25314194) | |
| 64-231, gnl|rheMac2|chr10 (58192811-58193025) | |
| 64-231, gnl|rn3|chr3 (141166117-141166324) | |
| 64-231, gnl|tetNig1|chr17 (7769087-7768923) | |
| 64-231, gnl|xenTro1|scaffold_911 (326568-326384) | |
| 263-839, gnl|bosTau2|chr13 (28112519-28113111) | |
| 263-839, gnl|Hg17|chr20 (24936331-24935674) | |
| 263-839, gnl|Mm7|chr2 (150360406-150359737) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 64-231, gnl|bosTau2|chr13 (28112295-28112462) | |
| 64-231, gnl|canFam2|chr23 (4194032-4194246) | |
| 64-231, gnl|danRer3|chr17 (1704714-1704903) | |
| 64-231, gnl|dasNov1|scaffold_109662 (1751-1544) | |
| 64-231, gnl|echTel1|scaffold_323443 (47603-47434) | |
| 64-231, gnl|fr1|chrUn (139349634-139349460) | |
| 64-231, gnl|hg17|chr20 (24936412-24936626) | |
| 64-231, gnl|Hg17|chr20 (24936578-24936411) | |
| 64-231, gnl|mm7|chr2 (150360484-150360691) | |
| 64-231, gnl|Mm7|chr2 (150360650-150360483) | |
| 64-231, gnl|monDom2|scaffold_1 (62137431-62137651) | |
| 64-231, gnl|oryCun1|scaffold_172951 (54422-54213) | |
| 64-231, gnl|panTro1|chr21 (25313980-25314194) | |
| 64-231, gnl|rheMac2|chr10 (58192811-58193025) | |
| 64-231, gnl|rn3|chr3 (141166117-141166324) | |
| 64-231, gnl|tetNig1|chr17 (7769087-7768923) | |
| 64-231, gnl|xenTro1|scaffold_911 (326568-326384) | |
| 263-839, gnl|bosTau2|chr13 (28112519-28113111) | |
| 263-839, gnl|Hg17|chr20 (24936331-24935674) | |
| 263-839, gnl|Mm7|chr2 (150360406-150359737) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| jej (0.197844) | |
| nje (0.16592) | |
| cli (0.152812) | |
| lnt (0.142308) | |
| med (0.116252) | |
| jca (0.11396) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jej (0.197844) | |
| nje (0.16592) | |
| cli (0.152812) | |
| lnt (0.142308) | |
| med (0.116252) | |
| jca (0.11396) |