Non-Coding RNA Search

Ss1.1-rlnt31c_e9.5

Sequence:


               
               CTGTTTCTGGTTTGTGAATAAGTTCATTTGTACTATTTTTAGATTCCATGTATAGAAGAC
ATCATATTTGTCTTTGTTCCACTTACATCGCTCAGTCTGATGATCTCG------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
AAAAGACACAAAAACCTTTTTATCGGTACCAAGAGTTTAACTTTTTAAGAAGCTTTAACA
GGTTATTCCTTTCGTTATTTTTATTGTGCTAAAATAATGCGATACCATTTTAACCTATCA
GATTAGATGAGGGGGAAATAGATACCAAGATAATTTATGAGAACACTAAGCCATTCAACT
TTTTTGGAGGGCCGTTTGGAGTAAATAGGCCAGTGTTTAATGTTCTTACCCAATAACCCA
ACGATTCCACTTCTAGGAATCTCTTCTCCAGAAAAACTAGCACTAGCGCCAGAAGTGTTG
AGCACGCTGTACACGGCATCATTTATTGTATCAAAACAATTAAAAACAACCCACATCCCC
ATAGACAGGGGATGGTTGGCATAACCTATTTCCATATAATGGAACCCCATGTAGCTTTTT
TTTTTTAAATAAAAAGAGGTAGCTTTAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGTTTCTGGTTTGTGAATAAGTTCATTTGTACTATTTTTAGATTCCATGTATAGAAGAC
ATCATATTTGTCTTTGTTCCACTTACATCGCTCAGTCTGATGATCTCG------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
AAAAGACACAAAAACCTTTTTATCGGTACCAAGAGTTTAACTTTTTAAGAAGCTTTAACA
GGTTATTCCTTTCGTTATTTTTATTGTGCTAAAATAATGCGATACCATTTTAACCTATCA
GATTAGATGAGGGGGAAATAGATACCAAGATAATTTATGAGAACACTAAGCCATTCAACT
TTTTTGGAGGGCCGTTTGGAGTAAATAGGCCAGTGTTTAATGTTCTTACCCAATAACCCA
ACGATTCCACTTCTAGGAATCTCTTCTCCAGAAAAACTAGCACTAGCGCCAGAAGTGTTG
AGCACGCTGTACACGGCATCATTTATTGTATCAAAACAATTAAAAACAACCCACATCCCC
ATAGACAGGGGATGGTTGGCATAACCTATTTCCATATAATGGAACCCCATGTAGCTTTTT
TTTTTTAAATAAAAAGAGGTAGCTTTAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-109, gnl|bosTau2|chr13 (51940799-51940908)
               


               
               128-518, gnl|bosTau2|chr19 (17274308-17274712)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-109, gnl|bosTau2|chr13 (51940799-51940908)
               


               
               128-518, gnl|bosTau2|chr19 (17274308-17274712)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lnt (0.142308)
               

               
               lyg (0.133103)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.142308)
               

               
               lyg (0.133103)

	1-109, gnl\|bosTau2\|chr13 (51940799-51940908)

	128-518, gnl\|bosTau2\|chr19 (17274308-17274712)