Non-Coding RNA Search

Ss1.1-rlnt31c_o4.5

Sequence:


               
               TAGCTATCTAATTATCAAATAAAAATGTTACTACTACTGTAATTGAAGGTCATAAAATGC
TTAACTATAACCTCTGCAGATTATTATTTTGTAATTTAATTAATGTTAGTACTACACGTT
CCTTATAGCATTATTTGCTTGATGTATGTAATTTCAAGATTTGATCCAATAAGATAGTAA
GGCAGAATGCTCTGTATTCAGCTGAAGTGAAAAATCCATAACAAAGAGCTACTCGTATTT
TATATTCATTTTTCCAAACCCAGAGACTTTCCAGAATTCAGAATTTACCGAGTTGATTTG
TAATTATGTTCCTTTTAAAGAATTTGAAGTAAAAAATGAAATTAGAAGAAACCACAGAAG
GCTTCGCAGCAGCAAACTTACTATTATAAATATCTTTCAATTCAAGATAAAGTGGGTTAT
GTTTTTACTCTCACTGTGGACTCAAATGAAGTACTATTCTACTTCGAAATAATACATTTG
AAAATCAGAGAAAGCTTAGAATCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGCTATCTAATTATCAAATAAAAATGTTACTACTACTGTAATTGAAGGTCATAAAATGC
TTAACTATAACCTCTGCAGATTATTATTTTGTAATTTAATTAATGTTAGTACTACACGTT
CCTTATAGCATTATTTGCTTGATGTATGTAATTTCAAGATTTGATCCAATAAGATAGTAA
GGCAGAATGCTCTGTATTCAGCTGAAGTGAAAAATCCATAACAAAGAGCTACTCGTATTT
TATATTCATTTTTCCAAACCCAGAGACTTTCCAGAATTCAGAATTTACCGAGTTGATTTG
TAATTATGTTCCTTTTAAAGAATTTGAAGTAAAAAATGAAATTAGAAGAAACCACAGAAG
GCTTCGCAGCAGCAAACTTACTATTATAAATATCTTTCAATTCAAGATAAAGTGGGTTAT
GTTTTTACTCTCACTGTGGACTCAAATGAAGTACTATTCTACTTCGAAATAATACATTTG
AAAATCAGAGAAAGCTTAGAATCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-504, gnl|bosTau2|chr1 (22377455-22377969)
               

               
               1-504, gnl|Hg17|chr3 (99735509-99736031)
               

               
               1-504, gnl|Mm7|chr16 (58653007-58652563)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-504, gnl|bosTau2|chr1 (22377455-22377969)
               

               
               1-504, gnl|Hg17|chr3 (99735509-99736031)
               

               
               1-504, gnl|Mm7|chr16 (58653007-58652563)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lin (0.145603)
               

               
               lnt (0.142308)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)
               

               
               lnt (0.142308)

	1-504, gnl\|bosTau2\|chr1 (22377455-22377969)
	1-504, gnl\|Hg17\|chr3 (99735509-99736031)
	1-504, gnl\|Mm7\|chr16 (58653007-58652563)