Non-Coding RNA Search

Ss1.1-rlnt32c_o12.5

Sequence:


               
               AGATGCAGCCAGCTCTGCCCCTCTATCCCAGGAAGAAGTAACCAGGCCCCACAGTGGCCT
CTAGGCTGGGCCCAGGCATGGCCAGCTCCAGGCAGGCTCCTCTGGGGAAGTTACTCTGGA
AAATGGAGGGAGAAGGAGTTAAAAACAAGGGACACCTGCACTTGGAAAATTATGGCCACT
TCTACTGATCGCCATCCCATACCCCATGGTACTGTGTGGTGTTCACTCCTGGAAATGCCT
CTGTGTGTGAATTCTATTTTTGTATTCATATGTTGAGATGGGTTTTGTGATTTCTCTGTC
TTCAAAGCACACTTCTTATAATTACTATTGCTCTTTTAATTGTCCACACCGCCCCTGAGC
GGTGGTGCGGACAACGCAGTGGTTTACCAAACCACCTACAAGGAAAGGGATAAGGTTAAT
ATTTATATGGCATAATTACATCATTATTGTATCTGTGTATTTCTGTACTAAATTGGTGCC
ATGTGTGTGAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATGCAGCCAGCTCTGCCCCTCTATCCCAGGAAGAAGTAACCAGGCCCCACAGTGGCCT
CTAGGCTGGGCCCAGGCATGGCCAGCTCCAGGCAGGCTCCTCTGGGGAAGTTACTCTGGA
AAATGGAGGGAGAAGGAGTTAAAAACAAGGGACACCTGCACTTGGAAAATTATGGCCACT
TCTACTGATCGCCATCCCATACCCCATGGTACTGTGTGGTGTTCACTCCTGGAAATGCCT
CTGTGTGTGAATTCTATTTTTGTATTCATATGTTGAGATGGGTTTTGTGATTTCTCTGTC
TTCAAAGCACACTTCTTATAATTACTATTGCTCTTTTAATTGTCCACACCGCCCCTGAGC
GGTGGTGCGGACAACGCAGTGGTTTACCAAACCACCTACAAGGAAAGGGATAAGGTTAAT
ATTTATATGGCATAATTACATCATTATTGTATCTGTGTATTTCTGTACTAAATTGGTGCC
ATGTGTGTGAGC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               90-492, gnl|bosTau2|chr22 (37016267-37015863)
               

               
               90-492, gnl|Hg17|chr3 (52442723-52442332)
               

               
               90-492, gnl|Mm7|chr14 (28659673-28660048)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               90-492, gnl|bosTau2|chr22 (37016267-37015863)
               

               
               90-492, gnl|Hg17|chr3 (52442723-52442332)
               

               
               90-492, gnl|Mm7|chr14 (28659673-28660048)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               mas (0.210305)
               

               
               aor (0.195274)
               

               
               eye (0.170503)
               

               
               lun (0.150489)
               

               
               hyp (0.142837)
               

               
               lnt (0.142308)

Expressed library(ies): 6 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)
               

               
               aor (0.195274)
               

               
               eye (0.170503)
               

               
               lun (0.150489)
               

               
               hyp (0.142837)
               

               
               lnt (0.142308)

	90-492, gnl\|bosTau2\|chr22 (37016267-37015863)
	90-492, gnl\|Hg17\|chr3 (52442723-52442332)
	90-492, gnl\|Mm7\|chr14 (28659673-28660048)

	mas (0.210305)
	aor (0.195274)
	eye (0.170503)
	lun (0.150489)
	hyp (0.142837)
	lnt (0.142308)