Ss1.1-rlyg03_m14.5
|
TTTTTTTTTTTTTTTTTTCACTTTATAAATTTCCTTATAAATTTCCTTTTCAGAACACAG
GCACAGATCTTTATTTCATTCCCTACAAGGATGTTCAAATGGCTATGTTAGGTTCCAAAT
TTGAAAAAAATCTGTTGCAGCAGGTGAGGTAAAACTAACTTGTGCAAATAAACACAAGCA
ACTCAAAGAACAATCTTTACGTTTATAAAACAATAATATTTTTAAACCAGCGCAAGGAAA
ACTGCTTGTACTGTTATGCAAGAACTATACAAAAAGATTCATGTTTTGTTTCAATTTCAG
TACCCGTGTCAAACTAGGCAGGTATTCAGAGGACATAGCTGACTCCAAGCCGCAAAAACC
AAATGGGGCCGTTTTCCCTCTAGTTACTCACTTGTCCTGGAAAATAACTGAAAAGCAGAG
ATAGAGTATATGGGATTGTAGCTCTAGCTTCTAGAAAGACAAAGATTAAAAACTAACACC
TTCTAAAGTCATTTTATTTTTAGTCAATTTACAGCTGCAGAAATCAACTCGATGTCAATT
ACAAAACCGAAGGCAGAGCTGAGCTCTTTGCCTGAGCAGAGTTGATTCTGCCCCTCCCAG
GGTGTACAATATCCCTTTCAGACCAAGGCTACGTATGTCATAACTATATTTAGAAATACG
GGGAGAGGAAAATATTACTACTGCCGTTCAAGCCTGTAACTGAGAAAGGAACACATGAGA
GCTCAGGGAATCCAAAGCTTAAACTTGAGTTCCTCAATCAACTTCAAATGTCGGATGACG
TTCAAAGGTGTTAATTATAAAAAGAAAATCCCAGTAACACATTCCAATTGAAGACATAGT
ACTCTCTCCCCACAGGGAAAAAAGAAAAAAAAAATCGATTTTTGGTGTCTTCTTCCAGCA
CTGTCGAAAGGTAAATACAGTTGCAAAGTTTTCGACAAATATTTCGGAAGCTCTGTGGAC
AGTTTGAAGCAGGGATTTGAGTCCGTGTACAGAAGTAACCGTTTGTTTACAGCCAGATAA
CTCTCGAAAATGGCAGAGTCGGAATACTGAGCTTCAGAAATCACGACAGCGAGAGACGCA
CGGAACACGAGCCGTGGCGCATCAGCCGATGAATCTTTCCGACGGCCACGTCTCCTGGAC
GTTCGCGGGGACGACCGGAGCCTCCTCCTCGGGCGGGGCCAGGGCCTCCATCTCGCGCAC
CACCTGCGTGAACACCTGGTCCACCATCAGTTTGCTCTTGGCCGTGACCTCCAGGAACGG
GCACCGCCACTCGCGGGCCAGCGCGCGGCCCTGCGCCGTCAGCACCTGGCGCTGGGCGTC
CAGGTCGGCCTTGGTGCCCACCAGCACCAGCGGCACGGCCTTGGGCCCCCGCAGCCGGCC
CATGCGCTCCCGCAGCGGCCGCACGGCCTCGAACGAGGCCTCGCTGCACACGCTGTAGAG
CACCACGAAGCCGTCGCTGTTCTTGATGTACAGGTCCTTGAGGGTGACCAGGTGCTCGGC
GCCCACGGTGTCCACGATCTCCAGCAGGGCGGGCGCCGCGTTCACCTCGATCACCTTGCT
GAAGAGCTCCTCCACCGACGGCTCGCACTGCTCGGGGAACCTGCCGCAGGCGAACTGCGT
GGCGAGGGCCGTCTTGCCCACGGCCACGCTCCCGAGCAGCACCACCCGGTAGCCCTTGGC
GGGTCGCGGCCCCAGGCCCGCCATGGCCGAGGCGCGGCAGGCGGGACGCGCGGCCGGAGG
ACGCGGAGGAAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTTTTTTTTTTTTTTTTCACTTTATAAATTTCCTTATAAATTTCCTTTTCAGAACACAG
GCACAGATCTTTATTTCATTCCCTACAAGGATGTTCAAATGGCTATGTTAGGTTCCAAAT
TTGAAAAAAATCTGTTGCAGCAGGTGAGGTAAAACTAACTTGTGCAAATAAACACAAGCA
ACTCAAAGAACAATCTTTACGTTTATAAAACAATAATATTTTTAAACCAGCGCAAGGAAA
ACTGCTTGTACTGTTATGCAAGAACTATACAAAAAGATTCATGTTTTGTTTCAATTTCAG
TACCCGTGTCAAACTAGGCAGGTATTCAGAGGACATAGCTGACTCCAAGCCGCAAAAACC
AAATGGGGCCGTTTTCCCTCTAGTTACTCACTTGTCCTGGAAAATAACTGAAAAGCAGAG
ATAGAGTATATGGGATTGTAGCTCTAGCTTCTAGAAAGACAAAGATTAAAAACTAACACC
TTCTAAAGTCATTTTATTTTTAGTCAATTTACAGCTGCAGAAATCAACTCGATGTCAATT
ACAAAACCGAAGGCAGAGCTGAGCTCTTTGCCTGAGCAGAGTTGATTCTGCCCCTCCCAG
GGTGTACAATATCCCTTTCAGACCAAGGCTACGTATGTCATAACTATATTTAGAAATACG
GGGAGAGGAAAATATTACTACTGCCGTTCAAGCCTGTAACTGAGAAAGGAACACATGAGA
GCTCAGGGAATCCAAAGCTTAAACTTGAGTTCCTCAATCAACTTCAAATGTCGGATGACG
TTCAAAGGTGTTAATTATAAAAAGAAAATCCCAGTAACACATTCCAATTGAAGACATAGT
ACTCTCTCCCCACAGGGAAAAAAGAAAAAAAAAATCGATTTTTGGTGTCTTCTTCCAGCA
CTGTCGAAAGGTAAATACAGTTGCAAAGTTTTCGACAAATATTTCGGAAGCTCTGTGGAC
AGTTTGAAGCAGGGATTTGAGTCCGTGTACAGAAGTAACCGTTTGTTTACAGCCAGATAA
CTCTCGAAAATGGCAGAGTCGGAATACTGAGCTTCAGAAATCACGACAGCGAGAGACGCA
CGGAACACGAGCCGTGGCGCATCAGCCGATGAATCTTTCCGACGGCCACGTCTCCTGGAC
GTTCGCGGGGACGACCGGAGCCTCCTCCTCGGGCGGGGCCAGGGCCTCCATCTCGCGCAC
CACCTGCGTGAACACCTGGTCCACCATCAGTTTGCTCTTGGCCGTGACCTCCAGGAACGG
GCACCGCCACTCGCGGGCCAGCGCGCGGCCCTGCGCCGTCAGCACCTGGCGCTGGGCGTC
CAGGTCGGCCTTGGTGCCCACCAGCACCAGCGGCACGGCCTTGGGCCCCCGCAGCCGGCC
CATGCGCTCCCGCAGCGGCCGCACGGCCTCGAACGAGGCCTCGCTGCACACGCTGTAGAG
CACCACGAAGCCGTCGCTGTTCTTGATGTACAGGTCCTTGAGGGTGACCAGGTGCTCGGC
GCCCACGGTGTCCACGATCTCCAGCAGGGCGGGCGCCGCGTTCACCTCGATCACCTTGCT
GAAGAGCTCCTCCACCGACGGCTCGCACTGCTCGGGGAACCTGCCGCAGGCGAACTGCGT
GGCGAGGGCCGTCTTGCCCACGGCCACGCTCCCGAGCAGCACCACCCGGTAGCCCTTGGC
GGGTCGCGGCCCCAGGCCCGCCATGGCCGAGGCGCGGCAGGCGGGACGCGCGGCCGGAGG
ACGCGGAGGAAT
|
|
gi|61838671|ref|XP_594321.1| |
Protein identifier
|
gi|61838671|ref|XP_594321.1| |
|
94-345, gnl|bosTau2|chr21 (47378456-47378694) |
|
94-345, gnl|canFam2|chr8 (74074711-74074507) |
|
94-345, gnl|dasNov1|scaffold_76885 (717-909) |
|
94-345, gnl|echTel1|scaffold_318989 (59460-59705) |
|
94-345, gnl|galGal2|chr4 (3287656-3287454) |
|
94-345, gnl|hg17|chr14 (102744643-102744864) |
|
94-345, gnl|Hg17|chr14 (102744908-102744664) |
|
94-345, gnl|loxAfr1|scaffold_21567 (4793-4553) |
|
94-345, gnl|Mm7|chrX (46097589-46097870) |
|
94-345, gnl|monDom2|scaffold_98 (3499186-3499445) |
|
94-345, gnl|oryCun1|scaffold_197318 (95466-95704) |
|
94-345, gnl|panTro1|chr15 (103357887-103358108) |
|
94-345, gnl|rheMac2|chrX (130416392-130416152) |
|
94-345, gnl|rn3|chr6 (136251214-136251023) |
| |
|
352-793, gnl|bosTau2|chr21 (47378741-47379210) |
|
352-793, gnl|Mm7|chrX (46097914-46098403) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
94-345, gnl|bosTau2|chr21 (47378456-47378694) |
|
94-345, gnl|canFam2|chr8 (74074711-74074507) |
|
94-345, gnl|dasNov1|scaffold_76885 (717-909) |
|
94-345, gnl|echTel1|scaffold_318989 (59460-59705) |
|
94-345, gnl|galGal2|chr4 (3287656-3287454) |
|
94-345, gnl|hg17|chr14 (102744643-102744864) |
|
94-345, gnl|Hg17|chr14 (102744908-102744664) |
|
94-345, gnl|loxAfr1|scaffold_21567 (4793-4553) |
|
94-345, gnl|Mm7|chrX (46097589-46097870) |
|
94-345, gnl|monDom2|scaffold_98 (3499186-3499445) |
|
94-345, gnl|oryCun1|scaffold_197318 (95466-95704) |
|
94-345, gnl|panTro1|chr15 (103357887-103358108) |
|
94-345, gnl|rheMac2|chrX (130416392-130416152) |
|
94-345, gnl|rn3|chr6 (136251214-136251023) |
| |
|
352-793, gnl|bosTau2|chr21 (47378741-47379210) |
|
352-793, gnl|Mm7|chrX (46097914-46098403) |
|
pro (1.5361) |
|
lyg (0.931718) |
|
mgp (0.922722) |
|
pty (0.856287) |
|
mcp (0.682594) |
|
pla (0.66836) |
|
nca (0.547495) |
|
rec (0.519211) |
|
kid (0.518941) |
|
isp (0.451128) |
|
ret (0.3862) |
|
tra (0.369276) |
|
gul (0.355177) |
|
jca (0.34188) |
|
fco (0.314416) |
|
ski (0.29347) |
|
lin (0.291206) |
|
hlv (0.278513) |
|
pan (0.23596) |
|
hea (0.204499) |
|
fcc (0.197785) |
|
col (0.195008) |
|
ldo (0.194005) |
|
sag (0.182715) |
|
ton (0.1755) |
|
sin (0.174948) |
|
eye (0.170503) |
|
nje (0.16592) |
|
mga (0.160205) |
|
tbr (0.154178) |
|
eli (0.151814) |
|
bfe (0.149858) |
|
liv (0.146284) |
|
spl (0.143184) |
|
ssp (0.13552) |
|
nmm (0.132802) |
|
ova (0.129132) |
|
ese (0.126502) |
|
eru (0.120048) |
|
cbl (0.114797) |
|
eje (0.0988338) |
|
pro (1.5361) |
|
lyg (0.931718) |
|
mgp (0.922722) |
|
pty (0.856287) |
|
mcp (0.682594) |
|
pla (0.66836) |
|
nca (0.547495) |
|
rec (0.519211) |
|
kid (0.518941) |
|
isp (0.451128) |
|
ret (0.3862) |
|
tra (0.369276) |
|
gul (0.355177) |
|
jca (0.34188) |
|
fco (0.314416) |
|
ski (0.29347) |
|
lin (0.291206) |
|
hlv (0.278513) |
|
pan (0.23596) |
|
hea (0.204499) |
|
fcc (0.197785) |
|
col (0.195008) |
|
ldo (0.194005) |
|
sag (0.182715) |
|
ton (0.1755) |
|
sin (0.174948) |
|
eye (0.170503) |
|
nje (0.16592) |
|
mga (0.160205) |
|
tbr (0.154178) |
|
eli (0.151814) |
|
bfe (0.149858) |
|
liv (0.146284) |
|
spl (0.143184) |
|
ssp (0.13552) |
|
nmm (0.132802) |
|
ova (0.129132) |
|
ese (0.126502) |
|
eru (0.120048) |
|
cbl (0.114797) |
|
eje (0.0988338) |
