Non-Coding RNA Search

Ss1.1-rlyg03_o6.5

Sequence:


               
               CCCCACTTACCTAGAAAGCATTACCAGGCGATTCTCTGGCATTCTCAGATGCAAACCTTA
CGTAGTGTTCTTTTTGCAATGACCTATTTATTTAACCTATTTATATTTATTTAATTTTTA
CTCTGAAGTGTATCCAGTGACAATTGCACTTGCTTAAAGCACATCAGATTCGCTTTGGAT
AACACCCCTGGACCACGGTAAAACTGGAAGAGGAAAAGTTACACTGTATCCTTCCACGGG
ATGGATGCCTTACAGTAGTTTTGTCATTAAAGGGTGAATAATTTGGTCAGGGTGAAAATG
TTAATTTTGAAGTGATTTTTTTTTTTTTTTTTAATTTCTGTGTCATTGTGTCTTCTCTGT
GGATGGTTAATTGTTGAATGGGTATGTGTTCATTGTGTGAGACAGTCCTCTTTGTGGAAC
CTAAAAATCCTCTTTTTAGCTTTATATTTTATAAACTGCCAGATTGTACAATTTTTATGT
GTATTTTTAAAGCTTAATGATGTGAGATTAATTACGTAAGTTAAACGGCCTATTTTTGTA
CCTCCTGTACAGTTTTATAATTTTGCTGATTGATGATGGCGTCTCATGTTGAGCCAACCA
CAAATACAGGTAGTTTTAGATTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCCACTTACCTAGAAAGCATTACCAGGCGATTCTCTGGCATTCTCAGATGCAAACCTTA
CGTAGTGTTCTTTTTGCAATGACCTATTTATTTAACCTATTTATATTTATTTAATTTTTA
CTCTGAAGTGTATCCAGTGACAATTGCACTTGCTTAAAGCACATCAGATTCGCTTTGGAT
AACACCCCTGGACCACGGTAAAACTGGAAGAGGAAAAGTTACACTGTATCCTTCCACGGG
ATGGATGCCTTACAGTAGTTTTGTCATTAAAGGGTGAATAATTTGGTCAGGGTGAAAATG
TTAATTTTGAAGTGATTTTTTTTTTTTTTTTTAATTTCTGTGTCATTGTGTCTTCTCTGT
GGATGGTTAATTGTTGAATGGGTATGTGTTCATTGTGTGAGACAGTCCTCTTTGTGGAAC
CTAAAAATCCTCTTTTTAGCTTTATATTTTATAAACTGCCAGATTGTACAATTTTTATGT
GTATTTTTAAAGCTTAATGATGTGAGATTAATTACGTAAGTTAAACGGCCTATTTTTGTA
CCTCCTGTACAGTTTTATAATTTTGCTGATTGATGATGGCGTCTCATGTTGAGCCAACCA
CAAATACAGGTAGTTTTAGATTTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-624, gnl|bosTau2|chr19 (40728276-40727651)
               

               
               1-624, gnl|Hg17|chr17 (59470836-59470237)
               

               
               1-624, gnl|Mm7|chr11 (106504282-106503692)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-624, gnl|bosTau2|chr19 (40728276-40727651)
               

               
               1-624, gnl|Hg17|chr17 (59470836-59470237)
               

               
               1-624, gnl|Mm7|chr11 (106504282-106503692)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               sug (0.254582)
               

               
               ill (0.175593)
               

               
               lyg (0.133103)
               

               
               tra (0.123092)
               

               
               pgl (0.118483)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sug (0.254582)
               

               
               ill (0.175593)
               

               
               lyg (0.133103)
               

               
               tra (0.123092)
               

               
               pgl (0.118483)

	1-624, gnl\|bosTau2\|chr19 (40728276-40727651)
	1-624, gnl\|Hg17\|chr17 (59470836-59470237)
	1-624, gnl\|Mm7\|chr11 (106504282-106503692)

	sug (0.254582)
	ill (0.175593)
	lyg (0.133103)
	tra (0.123092)
	pgl (0.118483)