Non-Coding RNA Search

Ss1.1-rlyg05_k10.5

Sequence:


               
               CTGATCTGTCCCACATTAAGCAAGGCCGGAGGGGCCCTGTGGGCCCACCAGGTGCCCCAG
GAAGAGATGGTTCTAAGGGGGAAAGAGGAGCACCTGGCCCCAGAGGGTCTCCAGGACCCC
CCGGCTCTTTTGATTTCCTCCTGCTCATGCTCGCGGACATCCGCAATGACATCACCGAGC
TGCAGGAAAAGGTGTTCGGGCACCGGACTCACTCTTCCACAGAGGAGTTCCCTTTACCTC
AGGAATTTTCCAGCTACCCAGAGACCTCAGACTTGGGCTCTGGAGACGACGACCCAAAAA
GAACGGAGAGGAGGGACTCGGGAGCCTCCAGAGACTTTTATCCTTAGCACAGCCTTGACA
TCTTCTCACCCAAGAAACGGAAGAGTGTTTCCTTCTGCGGTTAAATCACCCGAAGAACAA
AACAAAACAAAACACGGCTGGTGGCCCAGAAGAGATCAATTTTTATTTTCTTCTTTCTTT
TCCTGCCTTCTCCCTGCTTCTTTTCTTCCAAATACTATTTTCAGAGTCCCCTGCTAGACA
TGCTGAAGACATGAGGGAGTAAATGGTTGACTTACACGCTTCCTACTGAGCATCTACGGT
GGAACTTTTCTTTGACTTTCTTATTTTTCAGCGACTTCTGATTTCTGAATTGGGTACCCT
CAGAGTGTCTTAAAATTTGGCAGACTATCAGAAACGGGAAGAGGGCAAGGTGAGTTCTAA
GAAAATGTGAGTTTACTTATTTAAAAAATAGATGTGTCCAGAATAGACTATTAGCCCTCA
GTATCAAAATTAACCCTTTTCAGTGAAAAGGGGAGACAACAATGTATATTTACCTTGGTG
GATAACTCTTATTCCTTGTCAATCTAATAGATTTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGATCTGTCCCACATTAAGCAAGGCCGGAGGGGCCCTGTGGGCCCACCAGGTGCCCCAG
GAAGAGATGGTTCTAAGGGGGAAAGAGGAGCACCTGGCCCCAGAGGGTCTCCAGGACCCC
CCGGCTCTTTTGATTTCCTCCTGCTCATGCTCGCGGACATCCGCAATGACATCACCGAGC
TGCAGGAAAAGGTGTTCGGGCACCGGACTCACTCTTCCACAGAGGAGTTCCCTTTACCTC
AGGAATTTTCCAGCTACCCAGAGACCTCAGACTTGGGCTCTGGAGACGACGACCCAAAAA
GAACGGAGAGGAGGGACTCGGGAGCCTCCAGAGACTTTTATCCTTAGCACAGCCTTGACA
TCTTCTCACCCAAGAAACGGAAGAGTGTTTCCTTCTGCGGTTAAATCACCCGAAGAACAA
AACAAAACAAAACACGGCTGGTGGCCCAGAAGAGATCAATTTTTATTTTCTTCTTTCTTT
TCCTGCCTTCTCCCTGCTTCTTTTCTTCCAAATACTATTTTCAGAGTCCCCTGCTAGACA
TGCTGAAGACATGAGGGAGTAAATGGTTGACTTACACGCTTCCTACTGAGCATCTACGGT
GGAACTTTTCTTTGACTTTCTTATTTTTCAGCGACTTCTGATTTCTGAATTGGGTACCCT
CAGAGTGTCTTAAAATTTGGCAGACTATCAGAAACGGGAAGAGGGCAAGGTGAGTTCTAA
GAAAATGTGAGTTTACTTATTTAAAAAATAGATGTGTCCAGAATAGACTATTAGCCCTCA
GTATCAAAATTAACCCTTTTCAGTGAAAAGGGGAGACAACAATGTATATTTACCTTGGTG
GATAACTCTTATTCCTTGTCAATCTAATAGATTTAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q6MZX5_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q6MZX5_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               114-734, gnl|bosTau2|chr24 (44085539-44086138)
               

               
               114-734, gnl|Hg17|chr18 (55254353-55253723)
               

               
               114-734, gnl|Mm7|chr18 (66456863-66456334)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               114-734, gnl|bosTau2|chr24 (44085539-44086138)
               

               
               114-734, gnl|Hg17|chr18 (55254353-55253723)
               

               
               114-734, gnl|Mm7|chr18 (66456863-66456334)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lyg (0.266205)
               

               
               cov (0.132153)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lyg (0.266205)
               

               
               cov (0.132153)

	114-734, gnl\|bosTau2\|chr24 (44085539-44086138)
	114-734, gnl\|Hg17\|chr18 (55254353-55253723)
	114-734, gnl\|Mm7\|chr18 (66456863-66456334)