Non-Coding RNA Search

Ss1.1-rlyg06_l3.5

Sequence:


               
               GGCTTTATACACTGTAAATATTTTCTTCCTTTTGTGTTGTTTTCATTTTATTCTTTTATG
TCAAGTACATGTGTATCTTTTATTTGAGTTCATGTTTAGTAAATAGTTCTTTATTATAAA
AATGGCACATTATGGAAATTCCCATGTGGCATAGCAGGTTAAGTATCTGGTGTTGCTGCA
ACTGCGGTGTGGGTTTCATCCCTGGCCTGGGAATTTCCATGAGCCACAGTTGCAGCTAGG
AAAAAAAAACAAAGGTAGTGAATCCTTACTAAGATAATGAACATTTGAACAACACAAAGG
ACACTTACTGAAAAAGTCCTTTTCCTATTCTCTGATCTCTTAGGACCACTCACTCTAGGT
AGTTGCCACTTACAGTTTTTCATGTGTCCTAGAAATTTTTCATGCATAGTATTGTCACTA
CATTATAAGCATCTGAAGGGCAAAGAATTTGTTGCTCTTTGTACTCAAGAACAACTGCCA
TATAAATATTTTTGGATGATGGTAAATATCTTTTCTTCATTCTTAAAGTTTGATCAGGGA
AATTGCTATTTGTTTTAGGGTATACACTGCAAACTCTGAAGAAGCTTACAACAGTAGAAA
TAATTCTAGGAGTTCCTGCCATGGCTCAGTGGTTAACGAACCCGACTAGGAACTATGGGG
TTGCGGGTTCAATCCCTGGCCCTGCTCAGTGGATTGGGGATCTGGCGTTGCCGTGAGCTG
TGGTATAGGTCGCAGACGCGGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTTTATACACTGTAAATATTTTCTTCCTTTTGTGTTGTTTTCATTTTATTCTTTTATG
TCAAGTACATGTGTATCTTTTATTTGAGTTCATGTTTAGTAAATAGTTCTTTATTATAAA
AATGGCACATTATGGAAATTCCCATGTGGCATAGCAGGTTAAGTATCTGGTGTTGCTGCA
ACTGCGGTGTGGGTTTCATCCCTGGCCTGGGAATTTCCATGAGCCACAGTTGCAGCTAGG
AAAAAAAAACAAAGGTAGTGAATCCTTACTAAGATAATGAACATTTGAACAACACAAAGG
ACACTTACTGAAAAAGTCCTTTTCCTATTCTCTGATCTCTTAGGACCACTCACTCTAGGT
AGTTGCCACTTACAGTTTTTCATGTGTCCTAGAAATTTTTCATGCATAGTATTGTCACTA
CATTATAAGCATCTGAAGGGCAAAGAATTTGTTGCTCTTTGTACTCAAGAACAACTGCCA
TATAAATATTTTTGGATGATGGTAAATATCTTTTCTTCATTCTTAAAGTTTGATCAGGGA
AATTGCTATTTGTTTTAGGGTATACACTGCAAACTCTGAAGAAGCTTACAACAGTAGAAA
TAATTCTAGGAGTTCCTGCCATGGCTCAGTGGTTAACGAACCCGACTAGGAACTATGGGG
TTGCGGGTTCAATCCCTGGCCCTGCTCAGTGGATTGGGGATCTGGCGTTGCCGTGAGCTG
TGGTATAGGTCGCAGACGCGGCTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               251-609, gnl|bosTau2|chr3 (17132256-17131887)
               

               
               251-609, gnl|Hg17|chr1 (147130707-147131405)
               

               
               251-609, gnl|Mm7|chr3 (95708809-95708347)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               251-609, gnl|bosTau2|chr3 (17132256-17131887)
               

               
               251-609, gnl|Hg17|chr1 (147130707-147131405)
               

               
               251-609, gnl|Mm7|chr3 (95708809-95708347)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               lyg (0.266205)
               

               
               tra (0.123092)
               

               
               ecc (0.115035)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lyg (0.266205)
               

               
               tra (0.123092)
               

               
               ecc (0.115035)

	251-609, gnl\|bosTau2\|chr3 (17132256-17131887)
	251-609, gnl\|Hg17\|chr1 (147130707-147131405)
	251-609, gnl\|Mm7\|chr3 (95708809-95708347)