Non-Coding RNA Search

Ss1.1-rlyg08_a3.5

Sequence:


               
               CAGCAAGTAACTTGCCCAAACCCCATGGCAAGTTGGCAGCAGAGCCTGGATGTAGAGCCT
TTCTGAGTGGCCCCTGAGATGGCCAGGAGCCACCTGGAAGAGTAAATGCTTGGCAAGAAG
CTACCTGTCCCAGACACACGAGGAGCTTGGGTTCTGTCGCCCAGGGAGAGAGAGAAGCAA
AGGAGACCCACCAGAAAATACAGGGGGTGTTGTGTAACCCTTTAAAATGATGTCAATGAA
TACTTGGTAGCAACATGAGAAACTAAATATTCAAGAGCTTTTTAAAAAAAATCTAAATAT
ATTTGAAAACAGAATACATGGTAATGCACCATGATTGTAAAAACATCAGGAAAAAAATTT
GTTCGCATTTTTCCAAGTCTGGAAGGAAATGTGCATAGTTTAAAATGAGGATGAGAGCAT
GGATGAGGATGGTGGTGAGACCACAATTATTTGTAATTAGAATAAAAGCGCTTACTGTGC
ACTTAACCATGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCAAGTAACTTGCCCAAACCCCATGGCAAGTTGGCAGCAGAGCCTGGATGTAGAGCCT
TTCTGAGTGGCCCCTGAGATGGCCAGGAGCCACCTGGAAGAGTAAATGCTTGGCAAGAAG
CTACCTGTCCCAGACACACGAGGAGCTTGGGTTCTGTCGCCCAGGGAGAGAGAGAAGCAA
AGGAGACCCACCAGAAAATACAGGGGGTGTTGTGTAACCCTTTAAAATGATGTCAATGAA
TACTTGGTAGCAACATGAGAAACTAAATATTCAAGAGCTTTTTAAAAAAAATCTAAATAT
ATTTGAAAACAGAATACATGGTAATGCACCATGATTGTAAAAACATCAGGAAAAAAATTT
GTTCGCATTTTTCCAAGTCTGGAAGGAAATGTGCATAGTTTAAAATGAGGATGAGAGCAT
GGATGAGGATGGTGGTGAGACCACAATTATTTGTAATTAGAATAAAAGCGCTTACTGTGC
ACTTAACCATGA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               6-283, gnl|bosTau2|chr17 (41650549-41650269)
               


               
               287-485, gnl|bosTau2|chr17 (41650138-41649932)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-283, gnl|bosTau2|chr17 (41650549-41650269)
               


               
               287-485, gnl|bosTau2|chr17 (41650138-41649932)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               sto (0.179824)
               

               
               lyg (0.133103)
               

               
               thg (0.126791)
               

               
               ldo (0.0970026)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sto (0.179824)
               

               
               lyg (0.133103)
               

               
               thg (0.126791)
               

               
               ldo (0.0970026)

	6-283, gnl\|bosTau2\|chr17 (41650549-41650269)

	287-485, gnl\|bosTau2\|chr17 (41650138-41649932)