Ss1.1-rlyg09_i22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCATACTCACCAGATCTGATCATGTCCCTTTCTACAGATGGCTAAGAAGGAAACGCATA GCAAAACTAGCAGAGCAACAAGCTGTAAAAGAAAGAACTAGACAGCTCCGACTAGAAGCA AAGCGTTCTAAACAGTTACAGCATCACCTGTATACTATGTCAGAAGCCAAATCTTTTCGT TTTACTGATCATTACAACTGAAGGTATCTATTAAATACTTCATTTGGAAGCTGCTGTCCT CAAAGTTTTGGATATTTTTTAGGGCCTTGTGCTTTGATCATATTCTAAATTATGGAAATG CTAGTTATCTTTTGGTAATATTGATGGTGAATTTATCTTTTTTTTTTTTTCAACACTAGA GAAAAATAAACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCATACTCACCAGATCTGATCATGTCCCTTTCTACAGATGGCTAAGAAGGAAACGCATA GCAAAACTAGCAGAGCAACAAGCTGTAAAAGAAAGAACTAGACAGCTCCGACTAGAAGCA AAGCGTTCTAAACAGTTACAGCATCACCTGTATACTATGTCAGAAGCCAAATCTTTTCGT TTTACTGATCATTACAACTGAAGGTATCTATTAAATACTTCATTTGGAAGCTGCTGTCCT CAAAGTTTTGGATATTTTTTAGGGCCTTGTGCTTTGATCATATTCTAAATTATGGAAATG CTAGTTATCTTTTGGTAATATTGATGGTGAATTTATCTTTTTTTTTTTTTCAACACTAGA GAAAAATAAACT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 47-166, - strand, RNAz p=0.666686 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 47-166, - strand, RNAz p=0.666686 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 10-370, gnl|bosTau2|chr16 (24807653-24807293) | |
| 10-370, gnl|Hg17|chr1 (166096135-166095788) | |
| 10-370, gnl|Mm7|chr1 (164253753-164254101) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 10-370, gnl|bosTau2|chr16 (24807653-24807293) | |
| 10-370, gnl|Hg17|chr1 (166096135-166095788) | |
| 10-370, gnl|Mm7|chr1 (164253753-164254101) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| fce (0.271592) | |
| mgp (0.230681) | |
| fco (0.157208) | |
| lyg (0.133103) | |
| ret (0.128733) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fce (0.271592) | |
| mgp (0.230681) | |
| fco (0.157208) | |
| lyg (0.133103) | |
| ret (0.128733) |