Ss1.1-rlyg16_e3.5
|
AAATATGTCTGGAGCTGAGTGCCATGGCTAGAAGCTACTATCTCAGTTAAAAATTAATAA
GAACAGTACTTCAACCCATTACCCTATTTTCTAGAGAACCACAGTTATTTTGGTACACTT
TTCATAAAAAGAGTGTGCTGTGGGAAATACAAATTGGCAGTTAGTACCATTCAGAAATTT
TCTCAGTTCCATTTGAAATGGCTCAAATTTCTAAACCTGAGCCCACAGCTGCTCTTCTAC
CAGCTATTTACAGTGGTCTTTGAGGAAACTAAAATATTTTGGACATTCATAGTTTGTGAC
AAATCACCAATGTTAACAGCAAATCATGGTAATTACAGACCTCAGATTTTATTAAACTGC
TGAAATACTGTAGCCAATAACAGCAATAAATTTATATTTTAAATATATTTATAGTTGTCT
TCCCAGTGACAAAAGGAAATATTCCAAGACACTAGTAAACTGGAGAAACAGCTTTCCTAT
CTTTGCAACTCAAGATTTCGATTTAGAAGTTATAGTTAAAAATTTTTAAACCCAGTCAAA
ATAGTCTAGCTTTGTTTAAGGGTTCTGGTAAAAGCCAATATGCTTTGTAGAGCCCACACC
TAGCTCCAGCTTTTTGTTTAGCGCACTAATGATTATGTTTTTCCATATATATAGCACTGA
GTAAAGTGGTCATGCTAAATAACATTTTGGAAGAATTTCACCAAAGTGTAAATCAGTCTG
GTGATGTCGTTTTACCAAAGGACTGTAAATAAAGTGTGAAGAGTAAATAACATGAGAAAT
CATGATTTTTTTAGAAACAAGTGAGGTATGTGGGAATTTTTATAATTTTCATACTTAGAA
AAGATTAAAACTTCAAGTCTAATTCTTCAAGACTTATGAGAATGGTTTCAACTCCATTAG
TAGATGGTAAGCAATTTATAATCAACTTTTATTCATTTTTGTACCCTCCGACCCCCAATT
AGCTTACATAGTAAGCAAGCAAATAAATACTTATGAGTCAGCTTCTCA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAATATGTCTGGAGCTGAGTGCCATGGCTAGAAGCTACTATCTCAGTTAAAAATTAATAA
GAACAGTACTTCAACCCATTACCCTATTTTCTAGAGAACCACAGTTATTTTGGTACACTT
TTCATAAAAAGAGTGTGCTGTGGGAAATACAAATTGGCAGTTAGTACCATTCAGAAATTT
TCTCAGTTCCATTTGAAATGGCTCAAATTTCTAAACCTGAGCCCACAGCTGCTCTTCTAC
CAGCTATTTACAGTGGTCTTTGAGGAAACTAAAATATTTTGGACATTCATAGTTTGTGAC
AAATCACCAATGTTAACAGCAAATCATGGTAATTACAGACCTCAGATTTTATTAAACTGC
TGAAATACTGTAGCCAATAACAGCAATAAATTTATATTTTAAATATATTTATAGTTGTCT
TCCCAGTGACAAAAGGAAATATTCCAAGACACTAGTAAACTGGAGAAACAGCTTTCCTAT
CTTTGCAACTCAAGATTTCGATTTAGAAGTTATAGTTAAAAATTTTTAAACCCAGTCAAA
ATAGTCTAGCTTTGTTTAAGGGTTCTGGTAAAAGCCAATATGCTTTGTAGAGCCCACACC
TAGCTCCAGCTTTTTGTTTAGCGCACTAATGATTATGTTTTTCCATATATATAGCACTGA
GTAAAGTGGTCATGCTAAATAACATTTTGGAAGAATTTCACCAAAGTGTAAATCAGTCTG
GTGATGTCGTTTTACCAAAGGACTGTAAATAAAGTGTGAAGAGTAAATAACATGAGAAAT
CATGATTTTTTTAGAAACAAGTGAGGTATGTGGGAATTTTTATAATTTTCATACTTAGAA
AAGATTAAAACTTCAAGTCTAATTCTTCAAGACTTATGAGAATGGTTTCAACTCCATTAG
TAGATGGTAAGCAATTTATAATCAACTTTTATTCATTTTTGTACCCTCCGACCCCCAATT
AGCTTACATAGTAAGCAAGCAAATAAATACTTATGAGTCAGCTTCTCA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
lin (0.291206) |
|
hea (0.204499) |
|
isp (0.150376) |
|
ste (0.135208) |
|
lyg (0.133103) |
|
ova (0.129132) |
|
lin (0.291206) |
|
hea (0.204499) |
|
isp (0.150376) |
|
ste (0.135208) |
|
lyg (0.133103) |
|
ova (0.129132) |