Ss1.1-rlyg16_g3.5.5
|
GCAGCCAACAAACACAGGGGTTTAATAATTTCCTAATGGAATGTGTAACAGACCATATTT
CTGGGCCCGGAG------------GCCACTGCGTAGACCGGATTCCTCTCGCTCGCGCCT
CGCTCCGCGTCCTCTGCAACCATGTCTGACAAACCCGATATGGCTGAGATTGAGAAATTC
GATAAGTCGAAATTGAAGAAGACAGAAACGCAAGAGAAAAATCCACTGCCTTCAAAAGAA
ACGATTGAACAGGAGAAGCAAGCAGGCGAGTCGTAATGAGGCGCGCGCCGCCAGTATGCA
CTGTACATTCCACAAGCATTGCCTTCTTATTTTACTTCTTTTAGCTGTTTAACTTTGTAA
GATGCAAAGAGGTTGGATCAAGTTTAAATGACTGTGCTGCCCCTTTTCACATCAAAGAAT
GGCGAACTACTGACACGAAGGCCGCGCCTGCCTCTCCCATCTGCCTGGGTGGCTGGCAGG
GAAGGAAAAGAACTTGCATGTTGGTGAAGGAGGAAGCTGGGTGGAATTTAGAGTAAAAAG
CGAGCTGGTCCAAGGTGTCCTGCGGGCTGTAAAATGCAGTTTAATCAGAGTGCCATTTTT
TTTTGTTCAAATGATTTTAATTATTGGAATGCACAATTTTTTTAATATGCAAATAAAAAG
TTTAAAACGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCAGCCAACAAACACAGGGGTTTAATAATTTCCTAATGGAATGTGTAACAGACCATATTT
CTGGGCCCGGAG------------GCCACTGCGTAGACCGGATTCCTCTCGCTCGCGCCT
CGCTCCGCGTCCTCTGCAACCATGTCTGACAAACCCGATATGGCTGAGATTGAGAAATTC
GATAAGTCGAAATTGAAGAAGACAGAAACGCAAGAGAAAAATCCACTGCCTTCAAAAGAA
ACGATTGAACAGGAGAAGCAAGCAGGCGAGTCGTAATGAGGCGCGCGCCGCCAGTATGCA
CTGTACATTCCACAAGCATTGCCTTCTTATTTTACTTCTTTTAGCTGTTTAACTTTGTAA
GATGCAAAGAGGTTGGATCAAGTTTAAATGACTGTGCTGCCCCTTTTCACATCAAAGAAT
GGCGAACTACTGACACGAAGGCCGCGCCTGCCTCTCCCATCTGCCTGGGTGGCTGGCAGG
GAAGGAAAAGAACTTGCATGTTGGTGAAGGAGGAAGCTGGGTGGAATTTAGAGTAAAAAG
CGAGCTGGTCCAAGGTGTCCTGCGGGCTGTAAAATGCAGTTTAATCAGAGTGCCATTTTT
TTTTGTTCAAATGATTTTAATTATTGGAATGCACAATTTTTTTAATATGCAAATAAAAAG
TTTAAAACGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
|
gi|38679435|gb|AAR26539.1| |
Protein identifier
|
gi|38679435|gb|AAR26539.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
sto (59.5217) |
|
cut (47.5786) |
|
cmu (45.48) |
|
cst (42.8511) |
|
cje (36.8473) |
|
cki (20.1586) |
|
csk (18.86) |
|
che (17.9935) |
|
gul (13.8519) |
|
pgl (13.1517) |
|
sin (12.9461) |
|
bla (12.186) |
|
aor (11.3259) |
|
spc (10.7698) |
|
cbe (7.41627) |
|
hea (7.15746) |
|
lnt (7.11541) |
|
thg (6.08596) |
|
ova (6.06921) |
|
fat (6.04452) |
|
csp (5.96389) |
|
sme (5.8033) |
|
mgp (5.76701) |
|
fbs (5.61108) |
|
med (5.46385) |
|
nlu (5.36707) |
|
ill (4.91659) |
|
ece (4.5861) |
|
sug (4.58248) |
|
elu (4.23892) |
|
fhi (4.06987) |
|
fco (3.9302) |
|
col (3.90016) |
|
rec (3.80755) |
|
jej (3.75903) |
|
fty (3.69263) |
|
mga (3.68472) |
|
cag (3.47747) |
|
ebs (3.43073) |
|
ski (3.37491) |
|
amn (3.34169) |
|
cly (3.25733) |
|
hyp (3.14241) |
|
pro (3.0722) |
|
ssp (2.98143) |
|
fcc (2.96677) |
|
jca (2.96296) |
|
ecc (2.87588) |
|
vin (2.66046) |
|
nmm (2.65604) |
|
pan (2.59556) |
|
liv (2.48683) |
|
fce (2.44432) |
|
nco (2.42601) |
|
eje (2.37201) |
|
lyg (2.26274) |
|
ute (2.25734) |
|
tra (2.09257) |
|
nbm (2.08582) |
|
kid (2.07577) |
|
isp (1.95489) |
|
nca (1.91623) |
|
bfe (1.79829) |
|
cte (1.75644) |
|
lin (1.74723) |
|
nje (1.6592) |
|
spl (1.57503) |
|
eye (1.36402) |
|
eru (1.32053) |
|
mgm (1.2624) |
|
pty (1.14172) |
|
nep (1.10355) |
|
ste (1.08167) |
|
cli (1.06968) |
|
ton (1.053) |
|
mas (1.05152) |
|
hlv (0.974795) |
|
cov (0.792917) |
|
eep (0.735384) |
|
duo (0.691204) |
|
ese (0.632511) |
|
tes (0.623441) |
|
cga (0.558191) |
|
sag (0.548145) |
|
ret (0.514933) |
|
mcp (0.511945) |
|
eli (0.455443) |
|
nms (0.427716) |
|
fli (0.405762) |
|
cbr (0.255951) |
|
cbl (0.229595) |
|
lun (0.150489) |
|
clu (0.119646) |
|
cty (0.10408) |
|
ldo (0.0970026) |
|
sto (59.5217) |
|
cut (47.5786) |
|
cmu (45.48) |
|
cst (42.8511) |
|
cje (36.8473) |
|
cki (20.1586) |
|
csk (18.86) |
|
che (17.9935) |
|
gul (13.8519) |
|
pgl (13.1517) |
|
sin (12.9461) |
|
bla (12.186) |
|
aor (11.3259) |
|
spc (10.7698) |
|
cbe (7.41627) |
|
hea (7.15746) |
|
lnt (7.11541) |
|
thg (6.08596) |
|
ova (6.06921) |
|
fat (6.04452) |
|
csp (5.96389) |
|
sme (5.8033) |
|
mgp (5.76701) |
|
fbs (5.61108) |
|
med (5.46385) |
|
nlu (5.36707) |
|
ill (4.91659) |
|
ece (4.5861) |
|
sug (4.58248) |
|
elu (4.23892) |
|
fhi (4.06987) |
|
fco (3.9302) |
|
col (3.90016) |
|
rec (3.80755) |
|
jej (3.75903) |
|
fty (3.69263) |
|
mga (3.68472) |
|
cag (3.47747) |
|
ebs (3.43073) |
|
ski (3.37491) |
|
amn (3.34169) |
|
cly (3.25733) |
|
hyp (3.14241) |
|
pro (3.0722) |
|
ssp (2.98143) |
|
fcc (2.96677) |
|
jca (2.96296) |
|
ecc (2.87588) |
|
vin (2.66046) |
|
nmm (2.65604) |
|
pan (2.59556) |
|
liv (2.48683) |
|
fce (2.44432) |
|
nco (2.42601) |
|
eje (2.37201) |
|
lyg (2.26274) |
|
ute (2.25734) |
|
tra (2.09257) |
|
nbm (2.08582) |
|
kid (2.07577) |
|
isp (1.95489) |
|
nca (1.91623) |
|
bfe (1.79829) |
|
cte (1.75644) |
|
lin (1.74723) |
|
nje (1.6592) |
|
spl (1.57503) |
|
eye (1.36402) |
|
eru (1.32053) |
|
mgm (1.2624) |
|
pty (1.14172) |
|
nep (1.10355) |
|
ste (1.08167) |
|
cli (1.06968) |
|
ton (1.053) |
|
mas (1.05152) |
|
hlv (0.974795) |
|
cov (0.792917) |
|
eep (0.735384) |
|
duo (0.691204) |
|
ese (0.632511) |
|
tes (0.623441) |
|
cga (0.558191) |
|
sag (0.548145) |
|
ret (0.514933) |
|
mcp (0.511945) |
|
eli (0.455443) |
|
nms (0.427716) |
|
fli (0.405762) |
|
cbr (0.255951) |
|
cbl (0.229595) |
|
lun (0.150489) |
|
clu (0.119646) |
|
cty (0.10408) |
|
ldo (0.0970026) |
