Non-Coding RNA Search

Ss1.1-rlyg18_h9.5

Sequence:


               
               TTCAACCCCTAGGTGGTCAAGTGGGAACTTTTGAAAACTATCAAGAGGCTTGTTAGACAA
ATTTATATTCTGAAACCTCAATAAGAAAGCATTCCAGGTTTCACTTCTTTCCTTTTTTTT
TTTCTTTTTTTT------------ACCAAATCTTTTTTAAACCCATAGTTCTTGTGTCTT
GTTGGATTATTCTGCTGTGCACATTGTATTGGTCCTTGTTGCATGTGGTCTACTGTGTGT
TTTCCCATTTTATAAAACAGTGTTTCTCCATGCAAAAAAATAAGGAAAAAAATGATGTAC
ATATAAACACTTTCATTTTATGGCTCCTCCATGTTATTGTATATATCTGCCAGCACGTCC
CAGTTACACTCCTGCGATTCAGCTTATTTTTACCCTAACATAAATAGTATGTTTTGTAGT
AGCTATCAAATTTAAGAGAAAAAGCAATCAGAATGTTTGGATTTCTTCTATCTTAATGTG
AATTTCATAATTAATGTCTATTTATTCAGCTATTCATTAAAATACAGGATTCTTTGGAAA
AAACTGGTGTAGTCTATAGTTTCTGTTTTGTTGGCAGCCTATAACCAAAGATGATGTAAT
TCTCCTGAAAGCTGAGATAGTGATGATTTGATAGACATACACAACCAAAACTTCAGGATT
TACAACTTAAAAGCTATCAGAATATAATCTCCCTTTCGTAGACATACCAGACTACTTAAT
TGTCGGCCTTGTTTCTCATTCTGACATATTATACACAAAGTAGAAGTAATTTTTCTTTTT
TTAATACAAAGACTAGAAAGCAATTTAAGCAAACAATTCATTCCTGGCTTTGCATTAAGC
CCGACGAAGATAGATAACTGCTCTAAGTGAATGCACTAATATTACTTGCATTACTGTAAT
TGTATCCGTAACTGTAAAGATTTCAACTTGTAAAACAAGTATTTTGTATTGTGTGTAATT
TCATGTGTTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCAACCCCTAGGTGGTCAAGTGGGAACTTTTGAAAACTATCAAGAGGCTTGTTAGACAA
ATTTATATTCTGAAACCTCAATAAGAAAGCATTCCAGGTTTCACTTCTTTCCTTTTTTTT
TTTCTTTTTTTT------------ACCAAATCTTTTTTAAACCCATAGTTCTTGTGTCTT
GTTGGATTATTCTGCTGTGCACATTGTATTGGTCCTTGTTGCATGTGGTCTACTGTGTGT
TTTCCCATTTTATAAAACAGTGTTTCTCCATGCAAAAAAATAAGGAAAAAAATGATGTAC
ATATAAACACTTTCATTTTATGGCTCCTCCATGTTATTGTATATATCTGCCAGCACGTCC
CAGTTACACTCCTGCGATTCAGCTTATTTTTACCCTAACATAAATAGTATGTTTTGTAGT
AGCTATCAAATTTAAGAGAAAAAGCAATCAGAATGTTTGGATTTCTTCTATCTTAATGTG
AATTTCATAATTAATGTCTATTTATTCAGCTATTCATTAAAATACAGGATTCTTTGGAAA
AAACTGGTGTAGTCTATAGTTTCTGTTTTGTTGGCAGCCTATAACCAAAGATGATGTAAT
TCTCCTGAAAGCTGAGATAGTGATGATTTGATAGACATACACAACCAAAACTTCAGGATT
TACAACTTAAAAGCTATCAGAATATAATCTCCCTTTCGTAGACATACCAGACTACTTAAT
TGTCGGCCTTGTTTCTCATTCTGACATATTATACACAAAGTAGAAGTAATTTTTCTTTTT
TTAATACAAAGACTAGAAAGCAATTTAAGCAAACAATTCATTCCTGGCTTTGCATTAAGC
CCGACGAAGATAGATAACTGCTCTAAGTGAATGCACTAATATTACTTGCATTACTGTAAT
TGTATCCGTAACTGTAAAGATTTCAACTTGTAAAACAAGTATTTTGTATTGTGTGTAATT
TCATGTGTTAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-960, gnl|bosTau2|chr15 (4557945-4558891)
               

               
               7-960, gnl|Hg17|chr11 (95349922-95348671)
               

               
               7-960, gnl|Mm7|chr9 (13545060-13546041)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-960, gnl|bosTau2|chr15 (4557945-4558891)
               

               
               7-960, gnl|Hg17|chr11 (95349922-95348671)
               

               
               7-960, gnl|Mm7|chr9 (13545060-13546041)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               mga (0.160205)
               

               
               lyg (0.133103)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mga (0.160205)
               

               
               lyg (0.133103)

	7-960, gnl\|bosTau2\|chr15 (4557945-4558891)
	7-960, gnl\|Hg17\|chr11 (95349922-95348671)
	7-960, gnl\|Mm7\|chr9 (13545060-13546041)