Non-Coding RNA Search

Ss1.1-rlyg18_l16.5

Sequence:


               
               CGCGACTGGAGTTTTTTTTTTTTTTTTTTTTAAATGAGGAGGGAAGGAGGCAGCCCCAAC
CATAAAAAGCCGATTTCTGGATTCTTTAATACAGAGGTTTTAGGGTAAAGGCATTTCATG
TAAACTTAAATCGATATTCCAATCCAGTCATGAATATTCCAAGGTAAAGCTCTCTTTGTG
CTGTTAACTAATTTTTTTTTTTTTTTGGCAGCAAACCATTACTTAGGAAATGTCTAAACG
AATGAGAAAAAATTTCATGCAAATAATGATTTTTAGCCCTTAGGTTTTCTGTCCCTTTAA
ACTGTATGTGAGTCTTCGATTTCAATGTCCTTTCTTGCTGCTCTGGTTTCATCTAAGTTC
GTATTCCTACTGCAGTGCATACCAGTTTCCCGTAGGAGACCATCTCCTGGAATATGAAGC
TCTGGTGCCATTTGTGTCCACACGCAGCAGCTTCTGCGTACATGCATTTCGTTTTCTGTG
CACTCTGTTAGGCTGGTTGTGGCTAAAATCAGCTTACCTTTCCGTATTAGATTATTTCAC
TAATTGCTACAGGTAAAATGATGGAATCTTTGTACTAGAGAAAATTATTTCAATTTTATT
TTTCTACTGACATTTCTAATTCTGGTATAAATGTTTATCAATAAAGAATTACTTTCACTC
AAAAAAAAAAAAAAACTCCAGTCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCGACTGGAGTTTTTTTTTTTTTTTTTTTTAAATGAGGAGGGAAGGAGGCAGCCCCAAC
CATAAAAAGCCGATTTCTGGATTCTTTAATACAGAGGTTTTAGGGTAAAGGCATTTCATG
TAAACTTAAATCGATATTCCAATCCAGTCATGAATATTCCAAGGTAAAGCTCTCTTTGTG
CTGTTAACTAATTTTTTTTTTTTTTTGGCAGCAAACCATTACTTAGGAAATGTCTAAACG
AATGAGAAAAAATTTCATGCAAATAATGATTTTTAGCCCTTAGGTTTTCTGTCCCTTTAA
ACTGTATGTGAGTCTTCGATTTCAATGTCCTTTCTTGCTGCTCTGGTTTCATCTAAGTTC
GTATTCCTACTGCAGTGCATACCAGTTTCCCGTAGGAGACCATCTCCTGGAATATGAAGC
TCTGGTGCCATTTGTGTCCACACGCAGCAGCTTCTGCGTACATGCATTTCGTTTTCTGTG
CACTCTGTTAGGCTGGTTGTGGCTAAAATCAGCTTACCTTTCCGTATTAGATTATTTCAC
TAATTGCTACAGGTAAAATGATGGAATCTTTGTACTAGAGAAAATTATTTCAATTTTATT
TTTCTACTGACATTTCTAATTCTGGTATAAATGTTTATCAATAAAGAATTACTTTCACTC
AAAAAAAAAAAAAAACTCCAGTCG

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               17-586, gnl|bosTau2|chr18 (1796095-1796623)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-586, gnl|bosTau2|chr18 (1796095-1796623)

Expressed library(ies): 9 entry(ies)

More info

Expressed library(ies): 9 entry(ies)

Help | Less info


               
               tra (0.369276)
               

               
               pan (0.23596)
               

               
               mgp (0.230681)
               

               
               mgm (0.180343)
               

               
               gul (0.177588)
               

               
               ton (0.1755)
               

               
               lnt (0.142308)
               

               
               lyg (0.133103)
               

               
               thg (0.126791)

Expressed library(ies): 9 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.369276)
               

               
               pan (0.23596)
               

               
               mgp (0.230681)
               

               
               mgm (0.180343)
               

               
               gul (0.177588)
               

               
               ton (0.1755)
               

               
               lnt (0.142308)
               

               
               lyg (0.133103)
               

               
               thg (0.126791)

	tra (0.369276)
	pan (0.23596)
	mgp (0.230681)
	mgm (0.180343)
	gul (0.177588)
	ton (0.1755)
	lnt (0.142308)
	lyg (0.133103)
	thg (0.126791)