Non-Coding RNA Search

Ss1.1-rlyg19_c21.5

Sequence:


               
               TGACTTCCAGGTCAAAGATAATTATAGTCTGATCTTTTTCCACATCACAGAAGCTATTAG
CCTTTTAAATTTCTTTTCTAAATAAATGTTGATAGGTCTCATCATGCTTAAACTACCTTG
ACAGTATAAGGTACATCTCTGCTGTTTGCTTTCAGCTGATAAAACAAGTATATATTCGAA
AGGGAAAGCTTCCAGTTGTGCATAACCACACATCTAGGTGCTTTTCTCTGCTTACGGAAC
ATTTACTGTTTTGCCCTTACTGGCTTTAATGTTTGCTGCCAACCACATGACACATAAACA
TGTAATTTACAACCGTCTGTTTCCAGGTAGGTAATTACTTAGCAAACTAGTGCCAGCTGA
GATTCATGGGTAGCTCTGAGATGGCTGACAAGTTCTTGTCCTCTGCATTTGTGATAATGA
ACTTCTAACTCATGAATAGATTGATAGTACAGTGGACCCTGGAACAACACGGTTTGAACT
GCACAGGTCCACTTAACATGCGGAGTTTTTTCAATACATACAGACTGCAGTGCTACACGG
CCCCAGGTTGGTTGAATCCACAGATGTGGAACTGTGGATGCGGAGGGCCGGCTGGAAAGT
TGGACACAGGTTTTTGACTGCGTAGGGTGTCAGCATCCCCAAACCCTTGTTGTTCAAGAT
CAGCTGTAATTACAAGTTAAATAACTCAACATTCAGTGTCATTACGTAATATATGCTGTC
TTACTTGATTCTGTTTTTCAGACTTCTAGGTTTTCATTGTTGGAAGTGTCTCAGAGATGT
GTGCTTTTAGTTTTAAACACTCATTAACCAATATTCAGAAAAAATATAACACTTTTTTGC
CCAAGTGTTCATGAATGTAAGTTAAAAAATTATATTTGATTTGGATTCAAATATTTATAG
ATTTACACTATATTTCATCAAAATATATTGTATAATATTTAATAAAATCAAATACATAAA
ATAAAGTTTTCAACACTATTTATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGACTTCCAGGTCAAAGATAATTATAGTCTGATCTTTTTCCACATCACAGAAGCTATTAG
CCTTTTAAATTTCTTTTCTAAATAAATGTTGATAGGTCTCATCATGCTTAAACTACCTTG
ACAGTATAAGGTACATCTCTGCTGTTTGCTTTCAGCTGATAAAACAAGTATATATTCGAA
AGGGAAAGCTTCCAGTTGTGCATAACCACACATCTAGGTGCTTTTCTCTGCTTACGGAAC
ATTTACTGTTTTGCCCTTACTGGCTTTAATGTTTGCTGCCAACCACATGACACATAAACA
TGTAATTTACAACCGTCTGTTTCCAGGTAGGTAATTACTTAGCAAACTAGTGCCAGCTGA
GATTCATGGGTAGCTCTGAGATGGCTGACAAGTTCTTGTCCTCTGCATTTGTGATAATGA
ACTTCTAACTCATGAATAGATTGATAGTACAGTGGACCCTGGAACAACACGGTTTGAACT
GCACAGGTCCACTTAACATGCGGAGTTTTTTCAATACATACAGACTGCAGTGCTACACGG
CCCCAGGTTGGTTGAATCCACAGATGTGGAACTGTGGATGCGGAGGGCCGGCTGGAAAGT
TGGACACAGGTTTTTGACTGCGTAGGGTGTCAGCATCCCCAAACCCTTGTTGTTCAAGAT
CAGCTGTAATTACAAGTTAAATAACTCAACATTCAGTGTCATTACGTAATATATGCTGTC
TTACTTGATTCTGTTTTTCAGACTTCTAGGTTTTCATTGTTGGAAGTGTCTCAGAGATGT
GTGCTTTTAGTTTTAAACACTCATTAACCAATATTCAGAAAAAATATAACACTTTTTTGC
CCAAGTGTTCATGAATGTAAGTTAAAAAATTATATTTGATTTGGATTCAAATATTTATAG
ATTTACACTATATTTCATCAAAATATATTGTATAATATTTAATAAAATCAAATACATAAA
ATAAAGTTTTCAACACTATTTATA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1-984, gnl|bosTau2|chr26 (26488181-26487197)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-984, gnl|bosTau2|chr26 (26488181-26487197)

Expressed library(ies): 9 entry(ies)

More info

Expressed library(ies): 9 entry(ies)

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               pro (0.512033)
               

               
               lyg (0.266205)
               

               
               spc (0.226732)
               

               
               mgm (0.180343)
               

               
               fhi (0.169578)
               

               
               cbr (0.127975)
               

               
               sug (0.127291)
               

               
               bla (0.124347)
               

               
               eje (0.0988338)

Expressed library(ies): 9 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pro (0.512033)
               

               
               lyg (0.266205)
               

               
               spc (0.226732)
               

               
               mgm (0.180343)
               

               
               fhi (0.169578)
               

               
               cbr (0.127975)
               

               
               sug (0.127291)
               

               
               bla (0.124347)
               

               
               eje (0.0988338)

	pro (0.512033)
	lyg (0.266205)
	spc (0.226732)
	mgm (0.180343)
	fhi (0.169578)
	cbr (0.127975)
	sug (0.127291)
	bla (0.124347)
	eje (0.0988338)