Non-Coding RNA Search

Ss1.1-rlyg19_h9.5

Sequence:


               
               GAACTGTCTCCAGTTTTTTTTTTTTTTTTTTGTCTTTTGTCTTTTGAGGGCCACGCAGGA
TCTGAACCACGTTTACAACCTACACCACAGCTCATGGCAATGCCAGATCCTTAACCCACT
GAGCAAGGCCAGGGATGGAACCTATGTCCTCATGGATACTAGTCAGGTTCGTTAACCACT
GAGCCATGACGGGAACGCCTCTGGTAAATTTTCTTGAGTTGGCCTAACTTCTGGGAAATT
CCATTTGCAGTTCACTGACACTACTGCATTAATCTGGCAAGTGTGTTTTTCCTATGAAAG
TTTTGTTCAGATTATTTTTCCTTCTTTAGAGAAAAACTGATGCAATGTCTTTTCCAATTT
CACCATGAAAACGAATTAGGTTTGAGCATTTTTTTCTCATTTCTCTTGTATCTGTTTTAA
TGATTGTCATTTGCTCTGACCATTCAAGTCACTCCCTTCTTTTGAAATCTAATGACTTTC
TCCAACTGTGTAATTTTGTGGAGGTGAAGCATCTGCCACGGCTTAGGAACTGAATGAGTT
GTCAGAGATTGTTTAAATCTTTTAGGCCAAGTCTAAGGAATAACTGGTAACTTCTTTGCT
AGTGTAGAGGGGACTGTGTGGGATAGGGAAGGAACAAGAGGTACAGAAACACCTTGCAGG
AGAAGAGAGTTTCACCACAGTTCTGAACAGGAGCTCATGAACAAACAGGTAAAGTATAAG
TCTTCACATCCGGTTACATTTTAAAGAGGGGGAAAAAAATCAATCTGAGATCTGGGAAAG
TCAAGGAGAATTTTCAAGAACCCATAGTGATATAGAAATTTTTAAATCGACTCATAACAC
CTCCTGATTTATTTCCACACAACCCTTCCTTCAGCAAGAGCCAGCTATACTGTATTAAAA
AAAAAAAAAATCAGGAAGCTTGGAATGCAGACTTCCATAACGGAAAAGACTGAACCTCTG
GTGGTTATCGATTGTGTCATCCTGGGCAATTTGCCACCGTTCTATGCGATTCGGTTTCCT
CGTCTTTATTAATAAAATGGACATAATACTAACTGCCCTATGAGATCTTCAAGGTCCCCA
CGTAAAAGCCTGGGGCACTAGTCAGGGCCTGCGGAGGGAGACCCTGGCATAAGGCGCCTG
GAAAAGGCAGAAAGGAGTGACTCCGTCAACCCGAGCCCCAGACCAGCACCCGCATCCTCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACTGTCTCCAGTTTTTTTTTTTTTTTTTTGTCTTTTGTCTTTTGAGGGCCACGCAGGA
TCTGAACCACGTTTACAACCTACACCACAGCTCATGGCAATGCCAGATCCTTAACCCACT
GAGCAAGGCCAGGGATGGAACCTATGTCCTCATGGATACTAGTCAGGTTCGTTAACCACT
GAGCCATGACGGGAACGCCTCTGGTAAATTTTCTTGAGTTGGCCTAACTTCTGGGAAATT
CCATTTGCAGTTCACTGACACTACTGCATTAATCTGGCAAGTGTGTTTTTCCTATGAAAG
TTTTGTTCAGATTATTTTTCCTTCTTTAGAGAAAAACTGATGCAATGTCTTTTCCAATTT
CACCATGAAAACGAATTAGGTTTGAGCATTTTTTTCTCATTTCTCTTGTATCTGTTTTAA
TGATTGTCATTTGCTCTGACCATTCAAGTCACTCCCTTCTTTTGAAATCTAATGACTTTC
TCCAACTGTGTAATTTTGTGGAGGTGAAGCATCTGCCACGGCTTAGGAACTGAATGAGTT
GTCAGAGATTGTTTAAATCTTTTAGGCCAAGTCTAAGGAATAACTGGTAACTTCTTTGCT
AGTGTAGAGGGGACTGTGTGGGATAGGGAAGGAACAAGAGGTACAGAAACACCTTGCAGG
AGAAGAGAGTTTCACCACAGTTCTGAACAGGAGCTCATGAACAAACAGGTAAAGTATAAG
TCTTCACATCCGGTTACATTTTAAAGAGGGGGAAAAAAATCAATCTGAGATCTGGGAAAG
TCAAGGAGAATTTTCAAGAACCCATAGTGATATAGAAATTTTTAAATCGACTCATAACAC
CTCCTGATTTATTTCCACACAACCCTTCCTTCAGCAAGAGCCAGCTATACTGTATTAAAA
AAAAAAAAAATCAGGAAGCTTGGAATGCAGACTTCCATAACGGAAAAGACTGAACCTCTG
GTGGTTATCGATTGTGTCATCCTGGGCAATTTGCCACCGTTCTATGCGATTCGGTTTCCT
CGTCTTTATTAATAAAATGGACATAATACTAACTGCCCTATGAGATCTTCAAGGTCCCCA
CGTAAAAGCCTGGGGCACTAGTCAGGGCCTGCGGAGGGAGACCCTGGCATAAGGCGCCTG
GAAAAGGCAGAAAGGAGTGACTCCGTCAACCCGAGCCCCAGACCAGCACCCGCATCCTCG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               200-649, gnl|bosTau2|chr19 (17817019-17816558)
               

               
               200-649, gnl|Hg17|chr17 (2155465-2154992)
               


               
               693-1148, gnl|bosTau2|chr19 (17816549-17816082)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               200-649, gnl|bosTau2|chr19 (17817019-17816558)
               

               
               200-649, gnl|Hg17|chr17 (2155465-2154992)
               


               
               693-1148, gnl|bosTau2|chr19 (17816549-17816082)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               lyg (0.266205)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lyg (0.266205)

	200-649, gnl\|bosTau2\|chr19 (17817019-17816558)
	200-649, gnl\|Hg17\|chr17 (2155465-2154992)

	693-1148, gnl\|bosTau2\|chr19 (17816549-17816082)