Ss1.1-rlyg19_n7.5
|
AGGGACGCCTGAGTCCTGGGTGAGAGTCTTCCCGGGTACTTTGGGGCTAGAGGAATCCTG
AAACCATGGATCACCTATATATGCTTTGAGACATGCTTTAGATTTTTTTTTTCTGGAAGC
CCTGCAGCTACCCTAAAATTGAATGTATTGTTGCACAGACCTATGGCCAATGGTGGCAGA
GTCTCCATAGAACTATGCTTCGTGGTGTTCTGGGAAAAACCTTTCGACTTGTTGGCTATA
CTATTCAGTATGGCTGTATAGCTCATTGTGCTTTTGAATACGTTGGTGGTGTTGTCATGT
GTTCTGGACCATCAATGGAGCCTACAATTCAAAATTCAGATATTGTCTTTGCAGAAAATC
TTAGTCGACATTTTTATAGTATCCAAAGAGGTGACATTGTGATTGCAAAAAGCCCGAGTG
ATCCAAAGTCAAATATTTGTAAAAGAGTAATTGGTTTGGAAGGAGACAAAATTCTCACCA
ATAGCCCATCAGGTTTCTTTAAAGGTCATAGTTATGTGCCAACAGGTCACGTTTGGTTAG
AAGGTGATAATCTACAGAATTCTACAGATTCCAGGTACTATGGACCTGTTCCATATGGAC
TAATAAGAGGACGTATCTTCTTTAAGATTTGGCCTCTGAGTGATTTTGGATTTCTGCGTG
ACAGCCCTAATAGCTACAGATTTTCTGATGATTAGCAAGCATTTATTCTTTTGATTTGAT
TATTGTCTTCTAAGTGAATTTATTATTGTCACTGAAACCCTGTACTTACTAATAAACTAT
TTGCTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGGGACGCCTGAGTCCTGGGTGAGAGTCTTCCCGGGTACTTTGGGGCTAGAGGAATCCTG
AAACCATGGATCACCTATATATGCTTTGAGACATGCTTTAGATTTTTTTTTTCTGGAAGC
CCTGCAGCTACCCTAAAATTGAATGTATTGTTGCACAGACCTATGGCCAATGGTGGCAGA
GTCTCCATAGAACTATGCTTCGTGGTGTTCTGGGAAAAACCTTTCGACTTGTTGGCTATA
CTATTCAGTATGGCTGTATAGCTCATTGTGCTTTTGAATACGTTGGTGGTGTTGTCATGT
GTTCTGGACCATCAATGGAGCCTACAATTCAAAATTCAGATATTGTCTTTGCAGAAAATC
TTAGTCGACATTTTTATAGTATCCAAAGAGGTGACATTGTGATTGCAAAAAGCCCGAGTG
ATCCAAAGTCAAATATTTGTAAAAGAGTAATTGGTTTGGAAGGAGACAAAATTCTCACCA
ATAGCCCATCAGGTTTCTTTAAAGGTCATAGTTATGTGCCAACAGGTCACGTTTGGTTAG
AAGGTGATAATCTACAGAATTCTACAGATTCCAGGTACTATGGACCTGTTCCATATGGAC
TAATAAGAGGACGTATCTTCTTTAAGATTTGGCCTCTGAGTGATTTTGGATTTCTGCGTG
ACAGCCCTAATAGCTACAGATTTTCTGATGATTAGCAAGCATTTATTCTTTTGATTTGAT
TATTGTCTTCTAAGTGAATTTATTATTGTCACTGAAACCCTGTACTTACTAATAAACTAT
TTGCTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
|
gi|57099535|ref|XP_533164.1| |
Protein identifier
|
gi|57099535|ref|XP_533164.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
51-398, gnl|bosTau2|chr13 (33259467-33259818) |
|
51-398, gnl|Hg17|chr11 (63156126-63156472) |
|
51-398, gnl|Mm7|chr5 (56984841-56985180) |
| |
|
517-799, gnl|bosTau2|chr13 (33259869-33260150) |
|
517-799, gnl|canFam2|chr5 (25828785-25828954) |
|
517-799, gnl|dasNov1|scaffold_242515 (862-1047) |
|
517-799, gnl|echTel1|scaffold_320840 (79014-79177) |
|
517-799, gnl|Hg17|chr11 (63156593-63156878) |
|
517-799, gnl|hg17|chrX (126482805-126482986) |
|
517-799, gnl|loxAfr1|scaffold_21821 (9921-9763) |
|
517-799, gnl|mm7|chr5 (56985580-56985413) |
|
517-799, gnl|Mm7|chr5 (56985300-56985573) |
|
517-799, gnl|oryCun1|scaffold_211250 (7876-7706) |
|
517-799, gnl|panTro1|chr19 (68546703-68546880) |
|
517-799, gnl|rheMac2|chrX (125820582-125820767) |
|
517-799, gnl|rn3|chr3 (91463958-91464122) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
51-398, gnl|bosTau2|chr13 (33259467-33259818) |
|
51-398, gnl|Hg17|chr11 (63156126-63156472) |
|
51-398, gnl|Mm7|chr5 (56984841-56985180) |
| |
|
517-799, gnl|bosTau2|chr13 (33259869-33260150) |
|
517-799, gnl|canFam2|chr5 (25828785-25828954) |
|
517-799, gnl|dasNov1|scaffold_242515 (862-1047) |
|
517-799, gnl|echTel1|scaffold_320840 (79014-79177) |
|
517-799, gnl|Hg17|chr11 (63156593-63156878) |
|
517-799, gnl|hg17|chrX (126482805-126482986) |
|
517-799, gnl|loxAfr1|scaffold_21821 (9921-9763) |
|
517-799, gnl|mm7|chr5 (56985580-56985413) |
|
517-799, gnl|Mm7|chr5 (56985300-56985573) |
|
517-799, gnl|oryCun1|scaffold_211250 (7876-7706) |
|
517-799, gnl|panTro1|chr19 (68546703-68546880) |
|
517-799, gnl|rheMac2|chrX (125820582-125820767) |
|
517-799, gnl|rn3|chr3 (91463958-91464122) |
|
ste (0.405625) |
|
fbs (0.350693) |
|
mga (0.32041) |
|
sme (0.305437) |
|
pla (0.267344) |
|
ece (0.229305) |
|
tes (0.207814) |
|
hea (0.204499) |
|
jej (0.197844) |
|
ldo (0.194005) |
|
sag (0.182715) |
|
gul (0.177588) |
|
sin (0.174948) |
|
duo (0.172801) |
|
mcp (0.170648) |
|
tbr (0.154178) |
|
eli (0.151814) |
|
isp (0.150376) |
|
bfe (0.149858) |
|
ski (0.146735) |
|
lin (0.145603) |
|
hlv (0.139256) |
|
lyg (0.133103) |
|
kid (0.129735) |
|
ova (0.129132) |
|
tra (0.123092) |
|
pgl (0.118483) |
|
spc (0.113366) |
|
eje (0.0988338) |
|
ste (0.405625) |
|
fbs (0.350693) |
|
mga (0.32041) |
|
sme (0.305437) |
|
pla (0.267344) |
|
ece (0.229305) |
|
tes (0.207814) |
|
hea (0.204499) |
|
jej (0.197844) |
|
ldo (0.194005) |
|
sag (0.182715) |
|
gul (0.177588) |
|
sin (0.174948) |
|
duo (0.172801) |
|
mcp (0.170648) |
|
tbr (0.154178) |
|
eli (0.151814) |
|
isp (0.150376) |
|
bfe (0.149858) |
|
ski (0.146735) |
|
lin (0.145603) |
|
hlv (0.139256) |
|
lyg (0.133103) |
|
kid (0.129735) |
|
ova (0.129132) |
|
tra (0.123092) |
|
pgl (0.118483) |
|
spc (0.113366) |
|
eje (0.0988338) |
