Non-Coding RNA Search

Ss1.1-rlyg20_h3.5

Sequence:


               
               AGGACTTCTCTGCTAAGTTTCTAACCTTGATTCATCTCCTATTCATTTGTAATTCAACAT
TTTTTTTTCTTCAGGAAAAGTAAACCAAGCCTTTTTTATAGCTGAGAAAATCTTTTGGGT
GACTTGATGAATAAATGAATATTTGGTTGAATTTACAATATTACCATTTATATGTGATTT
TTCTCAACTCCATAAAATTCTCTACAGAATGAAATTCTAAAAGCAACTAGATTTTTATTT
CCCTGTATATAGTTGATATCTTCTGCTTGCATGCTTGTAAGATTCGCACATACATACATA
TAACTCACAGGCTAAATAATGCACCCCCAAAAGACAGGCACTTCCCATTCCCCGAAACTT
GTAAATGTCACTTAATATTGCATAAAATAACTTTGCAGAAGTGATTAAGTTGAAGATCTT
GAGGGGGCGGATAATATTGGATTAACCAGGTGCACAATAAATGCAATCACATGTATCCTT
ATAAAAGAAAGGCTGAGAGAGATTGGACACACAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGACTTCTCTGCTAAGTTTCTAACCTTGATTCATCTCCTATTCATTTGTAATTCAACAT
TTTTTTTTCTTCAGGAAAAGTAAACCAAGCCTTTTTTATAGCTGAGAAAATCTTTTGGGT
GACTTGATGAATAAATGAATATTTGGTTGAATTTACAATATTACCATTTATATGTGATTT
TTCTCAACTCCATAAAATTCTCTACAGAATGAAATTCTAAAAGCAACTAGATTTTTATTT
CCCTGTATATAGTTGATATCTTCTGCTTGCATGCTTGTAAGATTCGCACATACATACATA
TAACTCACAGGCTAAATAATGCACCCCCAAAAGACAGGCACTTCCCATTCCCCGAAACTT
GTAAATGTCACTTAATATTGCATAAAATAACTTTGCAGAAGTGATTAAGTTGAAGATCTT
GAGGGGGCGGATAATATTGGATTAACCAGGTGCACAATAAATGCAATCACATGTATCCTT
ATAAAAGAAAGGCTGAGAGAGATTGGACACACAGAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               14-516, gnl|bosTau2|chr21 (11560530-11560020)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-516, gnl|bosTau2|chr21 (11560530-11560020)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               tbr (0.154178)
               

               
               lyg (0.133103)
               

               
               ret (0.128733)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.154178)
               

               
               lyg (0.133103)
               

               
               ret (0.128733)