Non-Coding RNA Search

Ss1.1-rlyg21_d4.5

Sequence:


               
               TCTCATTTAAAAGACAGTACACTTCTAAAAATAACACCTATAGTTTATCATAAAATTTTG
GCCAGCCAGTTTTTGGTAAAAGGCCAGTATGTTATACTTGAACCTACTTCAAGAAATGCC
TTTTTATAAAGGAAAGGTTTTACCCAACTGTGAAGAAAAGTACCTGAAGTCATAGACACA
CAGTTGCTGGTCATTTTGATTGGAAGGGTTCAGATATTAATTTTATCTTTATAAAATCAT
GTAATTTCATGAAGAATCTTACCACCCGAAAACAATAAAGCCCCTGTAGATATACAGTGC
AGAGTTTTGAGAGTAACTATTTCAACTCACCTATATATCATAAATCTGTAATAATTCACA
GTCACCATTAAATGTTAGAATCATTAGGTTGACTTGCATACTTGTCGCTCACTCTGGCCA
CGTATCATGGAGAATTAGAAGATTGTATTTGTTGTCTCTAATGCAGTTGTGTTCTATTGT
TTTAATAATGATGTTAAGCAAGTTTGGTTCACGTACATTCCATGTTAATAATCATACTTT
TTAAAGAAGCAGTCCACGTATTCCAAAATTCAAGAGTCCAAACAAAAGAAAGCCCTACTT
GCATGTGAAATCTCTACAGAAATAAAAAGTAAACGAGTTCTGCATTTCAGGGTTGGCATG
TCGAACCAGCAGAGACGTTGGGCTATATGCTTCCGAGATGGAAATGTTTTCCTTTATTGT
ACTCTCAATTGTGTTTCTTTAATAAACCTTACAGAAGTCTCTACCTCAGGCACTAAGTGT
TAGATATGGTTAGCATACTGATACCGAAAAACTTAGCTAGGACTTCCAACCTTTTAAAAT
AATTTAAATGTAAAATTCAACTGTTAACCAGCAACTTATGTCATGTGATGTGCAGTTTGG
ATATTGTATGAACAGCTAAGGAATTACCTATTCTAGTGCCAAAGATCACTCGTTGCTAAT
TTTGTTCTGTATAGGTGATGTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTCATTTAAAAGACAGTACACTTCTAAAAATAACACCTATAGTTTATCATAAAATTTTG
GCCAGCCAGTTTTTGGTAAAAGGCCAGTATGTTATACTTGAACCTACTTCAAGAAATGCC
TTTTTATAAAGGAAAGGTTTTACCCAACTGTGAAGAAAAGTACCTGAAGTCATAGACACA
CAGTTGCTGGTCATTTTGATTGGAAGGGTTCAGATATTAATTTTATCTTTATAAAATCAT
GTAATTTCATGAAGAATCTTACCACCCGAAAACAATAAAGCCCCTGTAGATATACAGTGC
AGAGTTTTGAGAGTAACTATTTCAACTCACCTATATATCATAAATCTGTAATAATTCACA
GTCACCATTAAATGTTAGAATCATTAGGTTGACTTGCATACTTGTCGCTCACTCTGGCCA
CGTATCATGGAGAATTAGAAGATTGTATTTGTTGTCTCTAATGCAGTTGTGTTCTATTGT
TTTAATAATGATGTTAAGCAAGTTTGGTTCACGTACATTCCATGTTAATAATCATACTTT
TTAAAGAAGCAGTCCACGTATTCCAAAATTCAAGAGTCCAAACAAAAGAAAGCCCTACTT
GCATGTGAAATCTCTACAGAAATAAAAAGTAAACGAGTTCTGCATTTCAGGGTTGGCATG
TCGAACCAGCAGAGACGTTGGGCTATATGCTTCCGAGATGGAAATGTTTTCCTTTATTGT
ACTCTCAATTGTGTTTCTTTAATAAACCTTACAGAAGTCTCTACCTCAGGCACTAAGTGT
TAGATATGGTTAGCATACTGATACCGAAAAACTTAGCTAGGACTTCCAACCTTTTAAAAT
AATTTAAATGTAAAATTCAACTGTTAACCAGCAACTTATGTCATGTGATGTGCAGTTTGG
ATATTGTATGAACAGCTAAGGAATTACCTATTCTAGTGCCAAAGATCACTCGTTGCTAAT
TTTGTTCTGTATAGGTGATGTAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-984, gnl|bosTau2|chr19 (37490652-37491629)
               

               
               1-984, gnl|Hg17|chr17 (40233471-40231429)
               

               
               1-984, gnl|Mm7|chr11 (102905501-102903974)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-984, gnl|bosTau2|chr19 (37490652-37491629)
               

               
               1-984, gnl|Hg17|chr17 (40233471-40231429)
               

               
               1-984, gnl|Mm7|chr11 (102905501-102903974)

Expressed library(ies): 7 entry(ies)

More info

Expressed library(ies): 7 entry(ies)

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               lin (0.291206)
               

               
               lyg (0.266205)
               

               
               sag (0.182715)
               

               
               rec (0.17307)
               

               
               tbr (0.154178)
               

               
               liv (0.146284)
               

               
               spl (0.143184)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.291206)
               

               
               lyg (0.266205)
               

               
               sag (0.182715)
               

               
               rec (0.17307)
               

               
               tbr (0.154178)
               

               
               liv (0.146284)
               

               
               spl (0.143184)

	1-984, gnl\|bosTau2\|chr19 (37490652-37491629)
	1-984, gnl\|Hg17\|chr17 (40233471-40231429)
	1-984, gnl\|Mm7\|chr11 (102905501-102903974)

	lin (0.291206)
	lyg (0.266205)
	sag (0.182715)
	rec (0.17307)
	tbr (0.154178)
	liv (0.146284)
	spl (0.143184)