Non-Coding RNA Search

Ss1.1-rlyg23_h11.5

Sequence:


               
               TGAGTCCAGATTTGCAGTTGAGTGGGAAGTGTGTTTTTCAGGAGAAGGACAGATTTACCT
AGGGGCATTTCATGCTTCCCAAGAAAGGACTGTACGCCTGCGAGAGATGGCTAGGGACTG
GCCACAGGCTCCAATGGAGCATGCAAAGCAAGGGGTTGGCTGTTAGACTTCACTGGGTCA
TGGTCTGATATTATTTCCAAAATTGATTGGCTTGTTCCCAAGGAATATGTATTTGTCACT
AGAGCAGAACCGAAGAATCAAATGATTTCTTGCCATCTTTGCATAATCCTTGAGTCTCCT
AATTAAATATGTGTGTATGATGGATGTGTCTACTTCTGTGTCACCCACTGAAATGATGGA
GTGCCTGGATGACTTGTTAGTTTTATTGAGCATGAGCAGATATTTGAAGAAACTGTTGCA
CAATGTATGACAACATTTCCCATTTCTCTGAGTCCCGCAGCAGTTTAGGATGGGCAAATC
CAATGAACTAAAGTAAGTGATCTACATTTTGTGACTATTCCACGTATAAAATGAGAGCTT
TCAATTATTTCTAGAGAGTTCCTAGTCCAGCACTGTTTGGCAATCGTGAATTGATCCTAA
TTATTTGACAGAAAGAAAGGCTTTATTGATTGGTTGATTTAACACCAGTCCAAACAAAGA
ATGGTCTACACGCTTGCTCTCATTTCCTGTTAAGTTACTACTAGTCACCATGTGATTTTC
CTGACATTTGTTTTCAGTTGAATAACTGAAAATGTCAACAAAACGAAACCCACTGATGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGTCCAGATTTGCAGTTGAGTGGGAAGTGTGTTTTTCAGGAGAAGGACAGATTTACCT
AGGGGCATTTCATGCTTCCCAAGAAAGGACTGTACGCCTGCGAGAGATGGCTAGGGACTG
GCCACAGGCTCCAATGGAGCATGCAAAGCAAGGGGTTGGCTGTTAGACTTCACTGGGTCA
TGGTCTGATATTATTTCCAAAATTGATTGGCTTGTTCCCAAGGAATATGTATTTGTCACT
AGAGCAGAACCGAAGAATCAAATGATTTCTTGCCATCTTTGCATAATCCTTGAGTCTCCT
AATTAAATATGTGTGTATGATGGATGTGTCTACTTCTGTGTCACCCACTGAAATGATGGA
GTGCCTGGATGACTTGTTAGTTTTATTGAGCATGAGCAGATATTTGAAGAAACTGTTGCA
CAATGTATGACAACATTTCCCATTTCTCTGAGTCCCGCAGCAGTTTAGGATGGGCAAATC
CAATGAACTAAAGTAAGTGATCTACATTTTGTGACTATTCCACGTATAAAATGAGAGCTT
TCAATTATTTCTAGAGAGTTCCTAGTCCAGCACTGTTTGGCAATCGTGAATTGATCCTAA
TTATTTGACAGAAAGAAAGGCTTTATTGATTGGTTGATTTAACACCAGTCCAAACAAAGA
ATGGTCTACACGCTTGCTCTCATTTCCTGTTAAGTTACTACTAGTCACCATGTGATTTTC
CTGACATTTGTTTTCAGTTGAATAACTGAAAATGTCAACAAAACGAAACCCACTGATGTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               9-780, gnl|bosTau2|chr4 (35528470-35529228)
               

               
               9-780, gnl|Hg17|chr7 (33966529-33967294)
               

               
               9-780, gnl|Mm7|chr9 (23363593-23364317)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-780, gnl|bosTau2|chr4 (35528470-35529228)
               

               
               9-780, gnl|Hg17|chr7 (33966529-33967294)
               

               
               9-780, gnl|Mm7|chr9 (23363593-23364317)

Expressed library(ies): 7 entry(ies)

More info

Expressed library(ies): 7 entry(ies)

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               fat (0.294855)
               

               
               liv (0.292569)
               

               
               lyg (0.266205)
               

               
               thg (0.253582)
               

               
               tra (0.246184)
               

               
               hea (0.204499)
               

               
               jca (0.11396)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.294855)
               

               
               liv (0.292569)
               

               
               lyg (0.266205)
               

               
               thg (0.253582)
               

               
               tra (0.246184)
               

               
               hea (0.204499)
               

               
               jca (0.11396)

	9-780, gnl\|bosTau2\|chr4 (35528470-35529228)
	9-780, gnl\|Hg17\|chr7 (33966529-33967294)
	9-780, gnl\|Mm7\|chr9 (23363593-23364317)

	fat (0.294855)
	liv (0.292569)
	lyg (0.266205)
	thg (0.253582)
	tra (0.246184)
	hea (0.204499)
	jca (0.11396)