Non-Coding RNA Search

Ss1.1-rlyg24_e18.5

Sequence:


               
               GGAGCTTGGTGCAATGCGAAGCCATCTTTCCGACTTCAAAAAACACCGAGCTGCCAGAAT
TGACCATTATGTTGTCGAAGTCAATAAATTAATAATCAGGTTGGAGAAGCTCACTGCGTT
TGACAGAACAAATACCGAGTCTGCGAAGATCCGAGCAATAGAAAAGTCCGTGGTGCCTTG
GGTCAACGACCAGGATGTCCCTTTCTGTCCAGACTGTGGGAATAAGTTCAGCATCCGCAA
CCGCCGCCACCATACAGCATTGGCATATGTCCCTAGACCCAGAGCATGTATGGAAGAGAC
TTTGGGGATTCAGGCATCAAATGAAGCTGGCTTTTCACTTTTATGCTGTGTTTGTATTTT
CCCTGTCTAATACACTAAGGACACTTACTCATTATACTTGCTGCTCACTGTGTCTTTTCT
ATTCAGATACTAAAATGTACCTGAGTCATCAACAGCCATGTTGTAGGTCGGATGTTGGCA
TAAGTTATGTGATGGGACTTGGGTGAGAAGCTTGTCTTTTTGCCAGGTCACAGACTGTGG
TAGCAGATTGTGGTGGTCATCTGACAGTGACAGAGAGTTTGAGGGTCATTGATTTGCATG
CACTACTCTGAGGCCTTGTATTGAAAACTTTAAAAAAATAAAAGAACAGATGTTAGCGCT
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGCTTGGTGCAATGCGAAGCCATCTTTCCGACTTCAAAAAACACCGAGCTGCCAGAAT
TGACCATTATGTTGTCGAAGTCAATAAATTAATAATCAGGTTGGAGAAGCTCACTGCGTT
TGACAGAACAAATACCGAGTCTGCGAAGATCCGAGCAATAGAAAAGTCCGTGGTGCCTTG
GGTCAACGACCAGGATGTCCCTTTCTGTCCAGACTGTGGGAATAAGTTCAGCATCCGCAA
CCGCCGCCACCATACAGCATTGGCATATGTCCCTAGACCCAGAGCATGTATGGAAGAGAC
TTTGGGGATTCAGGCATCAAATGAAGCTGGCTTTTCACTTTTATGCTGTGTTTGTATTTT
CCCTGTCTAATACACTAAGGACACTTACTCATTATACTTGCTGCTCACTGTGTCTTTTCT
ATTCAGATACTAAAATGTACCTGAGTCATCAACAGCCATGTTGTAGGTCGGATGTTGGCA
TAAGTTATGTGATGGGACTTGGGTGAGAAGCTTGTCTTTTTGCCAGGTCACAGACTGTGG
TAGCAGATTGTGGTGGTCATCTGACAGTGACAGAGAGTTTGAGGGTCATTGATTTGCATG
CACTACTCTGAGGCCTTGTATTGAAAACTTTAAAAAAATAAAAGAACAGATGTTAGCGCT
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               252-654, gnl|bosTau2|chr22 (45862765-45863161)
               

               
               252-654, gnl|Hg17|chr3 (15086993-15086587)
               

               
               252-654, gnl|Mm7|chr6 (92267916-92267538)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               252-654, gnl|bosTau2|chr22 (45862765-45863161)
               

               
               252-654, gnl|Hg17|chr3 (15086993-15086587)
               

               
               252-654, gnl|Mm7|chr6 (92267916-92267538)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               sto (0.179824)
               

               
               lyg (0.133103)
               

               
               ebs (0.118301)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sto (0.179824)
               

               
               lyg (0.133103)
               

               
               ebs (0.118301)

	252-654, gnl\|bosTau2\|chr22 (45862765-45863161)
	252-654, gnl\|Hg17\|chr3 (15086993-15086587)
	252-654, gnl\|Mm7\|chr6 (92267916-92267538)