Non-Coding RNA Search

Ss1.1-rlyg24_f3.5

Sequence:


               
               GGTGCGGCCCTAAAAAGGCAAAAAGAAGGAGAGGGAAAAGAAGAAGAAGTTGTACTTCAT
TGCTAGAGAAAAATACTCAGGTCCTCTACTGATACGATGTTTTAACCTGACTGAGAATTA
TATTGTACCTTTGGTGCAGATGTGTGAAATTCCCCAAGGTGTCTGACTATCCAAAGGCAG
CATGTCCTATCTCTGTTTCTCTTCTTAAAGACAATCAGAAAGAAAGTATCTACTTCTGAA
GGAACGTCATTAGTGATCCCATCAATTTGGTTGACTAAAAGCAAAATCACCCTCTCCACT
CCCACCCCACACCTTACCCCACATTGGAATTTCAGTGAGTTGTAATGGATGGTGATGTTT
ATTCTTTCCTGCTCATGGGTCATCCTGCCTTTAATTGATGTGGAACAGATCTCTCCCCGT
GTTGGGTGCAGCACACCCAGGATTCTAATGTTGTCTCTTTCACAGTAACACCTGTCTGTA
ATGGCAACACATCCTATCTTTGAAGAGTGAATATAGTAGCCTTGTAGAAAATGGATAAAT
ACCTCTGTTGAAATGAGGACACACGCGCTGCTCATTTAAAAAAAAAATCATTATTGAAGG
AAATACCAAAGTTATATTTTAAAGGCTAGAGTTTTATAAAATATTGGGTCTGTTTGTGAC
TATGTAAGAACAGTCTATTTGACTGTTTCCCTAACACGGTCTAGTGATACTGTCTCTTCC
ATGTGTTTTTCTTTTAATCCTGTATCATCAATGGAAATTATACTTGAAAATGAAAGCTGT
TGTTATGTTTTTAACCTGTAGGATAAGATTCCAGTATTGTATATGAATTTCTATAAGAAG
TAAAAAAAAAAATCAAATCATGTACATTTGGAGATACTCACACATATTTTTTATGAAAAG
TAATGTTGCCTTTTAAACTACTCTGATGTGTCCCTTTTGAACAAAACTATTAAATATAAT
AAAAAAATGTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGCGGCCCTAAAAAGGCAAAAAGAAGGAGAGGGAAAAGAAGAAGAAGTTGTACTTCAT
TGCTAGAGAAAAATACTCAGGTCCTCTACTGATACGATGTTTTAACCTGACTGAGAATTA
TATTGTACCTTTGGTGCAGATGTGTGAAATTCCCCAAGGTGTCTGACTATCCAAAGGCAG
CATGTCCTATCTCTGTTTCTCTTCTTAAAGACAATCAGAAAGAAAGTATCTACTTCTGAA
GGAACGTCATTAGTGATCCCATCAATTTGGTTGACTAAAAGCAAAATCACCCTCTCCACT
CCCACCCCACACCTTACCCCACATTGGAATTTCAGTGAGTTGTAATGGATGGTGATGTTT
ATTCTTTCCTGCTCATGGGTCATCCTGCCTTTAATTGATGTGGAACAGATCTCTCCCCGT
GTTGGGTGCAGCACACCCAGGATTCTAATGTTGTCTCTTTCACAGTAACACCTGTCTGTA
ATGGCAACACATCCTATCTTTGAAGAGTGAATATAGTAGCCTTGTAGAAAATGGATAAAT
ACCTCTGTTGAAATGAGGACACACGCGCTGCTCATTTAAAAAAAAAATCATTATTGAAGG
AAATACCAAAGTTATATTTTAAAGGCTAGAGTTTTATAAAATATTGGGTCTGTTTGTGAC
TATGTAAGAACAGTCTATTTGACTGTTTCCCTAACACGGTCTAGTGATACTGTCTCTTCC
ATGTGTTTTTCTTTTAATCCTGTATCATCAATGGAAATTATACTTGAAAATGAAAGCTGT
TGTTATGTTTTTAACCTGTAGGATAAGATTCCAGTATTGTATATGAATTTCTATAAGAAG
TAAAAAAAAAAATCAAATCATGTACATTTGGAGATACTCACACATATTTTTTATGAAAAG
TAATGTTGCCTTTTAAACTACTCTGATGTGTCCCTTTTGAACAAAACTATTAAATATAAT
AAAAAAATGTTA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               46-965, gnl|bosTau2|chr4 (21072013-21072950)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               46-965, gnl|bosTau2|chr4 (21072013-21072950)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

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               lyg (0.798616)
               

               
               ret (0.643666)
               

               
               ski (0.146735)
               

               
               pla (0.133672)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lyg (0.798616)
               

               
               ret (0.643666)
               

               
               ski (0.146735)
               

               
               pla (0.133672)