Non-Coding RNA Search

Ss1.1-rlyg26_m15.5

Sequence:


               
               GGATTGGAACTAGTACTGTATAGAATGGTAAGGGAATATCGTGTTGCTCTCATCTGTTTA
TATAGCAGGTGCCACAACTTGACTTTGTCTTCAGCCTTGGTGCTTTGATCTTTCTGTATT
TTGGCCTGTCAGGTGTGGCCCAAGTTTACTTAATGAGGAAGTGAGCATAAGAACAAACAT
TCATGGTTAACATCCATACAGAGCTGTTATTTGTAGACACTAAGGTTTTTTGTTGTCAAA
CATCCCTGCTGGACAGGGTCTGTGAGTACACTGAATATACCCTTAAACATGGTAATTGGA
TAGTAAAAGGTTTTCTTAGTTCCAATGTTGTTTATTGCCTAAATGGACTTAGGTTCAAAA
TTATTTCTTCAGTTGTCTTAGGCAAGTTCTAACCAAGTAGGGAAGAATTAGGCATCAGTC
GTGCTGTCTAGTAGTGCTCTGAACAGGATTCAGGGCAGCAACTGCTATTTAATTTTGTCT
CCCTTATTCATTTCTTACCTGTTAATGAACTTTAGGTTTTCCCTGAAACTAGGTTCAATC
AGTTTCAAAATGAAATAGGCTTCTCAGGGACATATCCATTTCTTCCTAGTCTGCCTTTGG
ATTAAAGCACCAAGCAGAGAACTTACTTCCCTTTGCTGTATGCTGTGATCCCTACTATGT
TAATTCTTAAGAAGCCAAAATATTACTAGAAGGCTGGCAGAATACAAGTGAATGTTTTCA
TAATGGAGTATCAAGTAACATTGTTTTTTCCTGGTTATCACTTCATGGGAGGAGTTTAAA
AGTTTAAAAACAGTAGACTTTTTGTTCTTGGTTCTGCCACTCATTGGTTGGTTATGAGGT
CTGAAGGTAAGTCAACCTCCCTGACCTTCCCCATGAGTAATAGACAAATACTTGATGTTA
GCATGATAGGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGATTGGAACTAGTACTGTATAGAATGGTAAGGGAATATCGTGTTGCTCTCATCTGTTTA
TATAGCAGGTGCCACAACTTGACTTTGTCTTCAGCCTTGGTGCTTTGATCTTTCTGTATT
TTGGCCTGTCAGGTGTGGCCCAAGTTTACTTAATGAGGAAGTGAGCATAAGAACAAACAT
TCATGGTTAACATCCATACAGAGCTGTTATTTGTAGACACTAAGGTTTTTTGTTGTCAAA
CATCCCTGCTGGACAGGGTCTGTGAGTACACTGAATATACCCTTAAACATGGTAATTGGA
TAGTAAAAGGTTTTCTTAGTTCCAATGTTGTTTATTGCCTAAATGGACTTAGGTTCAAAA
TTATTTCTTCAGTTGTCTTAGGCAAGTTCTAACCAAGTAGGGAAGAATTAGGCATCAGTC
GTGCTGTCTAGTAGTGCTCTGAACAGGATTCAGGGCAGCAACTGCTATTTAATTTTGTCT
CCCTTATTCATTTCTTACCTGTTAATGAACTTTAGGTTTTCCCTGAAACTAGGTTCAATC
AGTTTCAAAATGAAATAGGCTTCTCAGGGACATATCCATTTCTTCCTAGTCTGCCTTTGG
ATTAAAGCACCAAGCAGAGAACTTACTTCCCTTTGCTGTATGCTGTGATCCCTACTATGT
TAATTCTTAAGAAGCCAAAATATTACTAGAAGGCTGGCAGAATACAAGTGAATGTTTTCA
TAATGGAGTATCAAGTAACATTGTTTTTTCCTGGTTATCACTTCATGGGAGGAGTTTAAA
AGTTTAAAAACAGTAGACTTTTTGTTCTTGGTTCTGCCACTCATTGGTTGGTTATGAGGT
CTGAAGGTAAGTCAACCTCCCTGACCTTCCCCATGAGTAATAGACAAATACTTGATGTTA
GCATGATAGGGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               2-432, gnl|bosTau2|chrX (168236-168666)
               

               
               2-432, gnl|Hg17|chr11 (111459276-111459686)
               

               
               2-432, gnl|Mm7|chr10 (21778618-21778229)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-432, gnl|bosTau2|chrX (168236-168666)
               

               
               2-432, gnl|Hg17|chr11 (111459276-111459686)
               

               
               2-432, gnl|Mm7|chr10 (21778618-21778229)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               lin (0.145603)
               

               
               lyg (0.133103)
               

               
               tra (0.123092)
               

               
               cty (0.10408)
               

               
               ldo (0.0970026)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)
               

               
               lyg (0.133103)
               

               
               tra (0.123092)
               

               
               cty (0.10408)
               

               
               ldo (0.0970026)

	2-432, gnl\|bosTau2\|chrX (168236-168666)
	2-432, gnl\|Hg17\|chr11 (111459276-111459686)
	2-432, gnl\|Mm7\|chr10 (21778618-21778229)

	lin (0.145603)
	lyg (0.133103)
	tra (0.123092)
	cty (0.10408)
	ldo (0.0970026)