Non-Coding RNA Search

Ss1.1-rlyg31_p3.5

Sequence:


               
               AGCCAGACGGAGAAAAAGATCCAGATTTTAATCAAAGCAACGGAGGAACAAAGCGGCAGA
AGATATCTCATCAAAATTATATAGCCTATCAAAAGCAAGTTATTCGGCGGAGTATGCGAC
ATAGAAAAGTTCGTGGTGAAAAGGCACTTCTTGTTTCTGCTAATCAAACATTAAAAGAAC
TGAAAATTCAGATCATGCATGCATTTTCAGTTGCTCCTTTTGACCAGAACCTGTCCATTG
ACGGAAAGATTTTAAGTGATGACTGTGCCACCCTCGGAACCCTTGGCGTCATTCCTGAAT
CTGTCATTTTGTTAAAGGCTGATGAACCAATTGCAGATTATGCTGCAATGGATGATGTCA
TGCAAGTGTGTATGCCAGAAGAAGGGTTTAAAGGTACTGGTCTGCTTGGACATTAATGTT
TTGAACACTTGCTGACTGCTAAGAAATGACCAGAAGGGAAGAGGAGTTTGACATGTTAGG
GCACAGAAAAAGTGGATCTAAGGATTAAAGCGTTACAGGACTCTTCCAAAAGGCAGAAAA
CCATTCAAAAGTGACTGTCCCACAATGCCTTATGTCAAATAAAGCAGATTGCACTGAAGG
CCATCAGACTTGAAGGAAATGTTTCAAATTTTATATTTAAGGGGGGTGGTGGGAGGGAGA
AGGGCAAGTAAAGACTGAGAAGGTTTAGTAGCAGCATCCGTAAATCATGTTTACATATGA
GATTTATAGTCACAGGAGGCAATACAGTTCTGTTCTGTTTCCTTGCTCGAGTTTCATACC
AGATGCACTGGTCCATAACAGACTTATATCACCGTAGATGGGACGACAGTCTGCTCTGAA
CTAAAAGTCCTTCTTTAGAGACATAACCTGCTTACCAATACCTGTCTTTGATTCATATTT
TACTTTCAATAAAGCATGAAAGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCCAGACGGAGAAAAAGATCCAGATTTTAATCAAAGCAACGGAGGAACAAAGCGGCAGA
AGATATCTCATCAAAATTATATAGCCTATCAAAAGCAAGTTATTCGGCGGAGTATGCGAC
ATAGAAAAGTTCGTGGTGAAAAGGCACTTCTTGTTTCTGCTAATCAAACATTAAAAGAAC
TGAAAATTCAGATCATGCATGCATTTTCAGTTGCTCCTTTTGACCAGAACCTGTCCATTG
ACGGAAAGATTTTAAGTGATGACTGTGCCACCCTCGGAACCCTTGGCGTCATTCCTGAAT
CTGTCATTTTGTTAAAGGCTGATGAACCAATTGCAGATTATGCTGCAATGGATGATGTCA
TGCAAGTGTGTATGCCAGAAGAAGGGTTTAAAGGTACTGGTCTGCTTGGACATTAATGTT
TTGAACACTTGCTGACTGCTAAGAAATGACCAGAAGGGAAGAGGAGTTTGACATGTTAGG
GCACAGAAAAAGTGGATCTAAGGATTAAAGCGTTACAGGACTCTTCCAAAAGGCAGAAAA
CCATTCAAAAGTGACTGTCCCACAATGCCTTATGTCAAATAAAGCAGATTGCACTGAAGG
CCATCAGACTTGAAGGAAATGTTTCAAATTTTATATTTAAGGGGGGTGGTGGGAGGGAGA
AGGGCAAGTAAAGACTGAGAAGGTTTAGTAGCAGCATCCGTAAATCATGTTTACATATGA
GATTTATAGTCACAGGAGGCAATACAGTTCTGTTCTGTTTCCTTGCTCGAGTTTCATACC
AGATGCACTGGTCCATAACAGACTTATATCACCGTAGATGGGACGACAGTCTGCTCTGAA
CTAAAAGTCCTTCTTTAGAGACATAACCTGCTTACCAATACCTGTCTTTGATTCATATTT
TACTTTCAATAAAGCATGAAAGTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|7019984|dbj|BAA90950.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|7019984|dbj|BAA90950.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               301-922, gnl|bosTau2|chr7 (566717-567330)
               

               
               301-922, gnl|Hg17|chr1 (21751240-21750713)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               301-922, gnl|bosTau2|chr7 (566717-567330)
               

               
               301-922, gnl|Hg17|chr1 (21751240-21750713)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               ova (0.258264)
               

               
               cmu (0.186393)
               

               
               fty (0.17584)
               

               
               fat (0.147427)
               

               
               hyp (0.142837)
               

               
               lyg (0.133103)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.258264)
               

               
               cmu (0.186393)
               

               
               fty (0.17584)
               

               
               fat (0.147427)
               

               
               hyp (0.142837)
               

               
               lyg (0.133103)

	301-922, gnl\|bosTau2\|chr7 (566717-567330)
	301-922, gnl\|Hg17\|chr1 (21751240-21750713)

	ova (0.258264)
	cmu (0.186393)
	fty (0.17584)
	fat (0.147427)
	hyp (0.142837)
	lyg (0.133103)