Non-Coding RNA Search

Ss1.1-rlyg34_c12.5

Sequence:


               
               GCGTCCTGGCCGAGGCAGAGCGGCCAGCCCTCAGGCGGGTGACCCCTACTTCCCCCCCTG
GAGACCTCGCGCTGCCCTAATGAAAACAGCTCATTCAACTCAGGCAGAGCTAGTGCAGCT
CATGGCCAGGATACAGGCGCTGAGGCTCATGTGACTGCACCCGCCGTGCAGGCAACGTAA
AACTGGTACTGCCATGACCATGTGAGCAGGTGGCCTCCTGTCTGCCTGGAGCAGCAAGTG
GGGGACACAGCCGTGGGCAGCAGAGGTGGCGGGTTGCAGGGCTGCATGGGGACGGTGGCC
AGCTGTGTGTCAGTGCTGTCTGCTGACTGTCACTGGCAGCCGTCGGCAGGGACTGTTTCA
AGCAATAACGCTCCCCAAGAGCAGCTTCCCACGTGGCCACAGCCGGGCCCCGTTGCAGGG
CTGGGCGTTGAGGGTGCAAGGCTGCCCTCAGTTTCCGCGAATGCCGGTCGGTGTTCATTC
CTGTGCTGGGAGGAATTCTAAAACGGGGAGTCTCAGAAAAATGTCCTCATTCAGAAGGGA
GTTCTGTGAAATTTCTTTCTTGTGTTCACCTTACCACACTTCATCCCAAAAGATGATGCA
GCTTTAACGTGAATGTTACATTTTATTTTCCAGGAGTTATTATCGATGTCCTCTTTGTAA
AGGAAAGATGCTACTGTAAATCTTTTTATTAAATGATGTAAAGATGTATATCTGTATTTT
TGGATCATGTTATAGAATATGGATATATTGTTTAATGAATAAAGTATTTTTTTGGAACAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGTCCTGGCCGAGGCAGAGCGGCCAGCCCTCAGGCGGGTGACCCCTACTTCCCCCCCTG
GAGACCTCGCGCTGCCCTAATGAAAACAGCTCATTCAACTCAGGCAGAGCTAGTGCAGCT
CATGGCCAGGATACAGGCGCTGAGGCTCATGTGACTGCACCCGCCGTGCAGGCAACGTAA
AACTGGTACTGCCATGACCATGTGAGCAGGTGGCCTCCTGTCTGCCTGGAGCAGCAAGTG
GGGGACACAGCCGTGGGCAGCAGAGGTGGCGGGTTGCAGGGCTGCATGGGGACGGTGGCC
AGCTGTGTGTCAGTGCTGTCTGCTGACTGTCACTGGCAGCCGTCGGCAGGGACTGTTTCA
AGCAATAACGCTCCCCAAGAGCAGCTTCCCACGTGGCCACAGCCGGGCCCCGTTGCAGGG
CTGGGCGTTGAGGGTGCAAGGCTGCCCTCAGTTTCCGCGAATGCCGGTCGGTGTTCATTC
CTGTGCTGGGAGGAATTCTAAAACGGGGAGTCTCAGAAAAATGTCCTCATTCAGAAGGGA
GTTCTGTGAAATTTCTTTCTTGTGTTCACCTTACCACACTTCATCCCAAAAGATGATGCA
GCTTTAACGTGAATGTTACATTTTATTTTCCAGGAGTTATTATCGATGTCCTCTTTGTAA
AGGAAAGATGCTACTGTAAATCTTTTTATTAAATGATGTAAAGATGTATATCTGTATTTT
TGGATCATGTTATAGAATATGGATATATTGTTTAATGAATAAAGTATTTTTTTGGAACAA
AAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               103-781, gnl|bosTau2|chr14 (8172559-8173250)
               

               
               103-781, gnl|Hg17|chr2 (242388001-242388883)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               103-781, gnl|bosTau2|chr14 (8172559-8173250)
               

               
               103-781, gnl|Hg17|chr2 (242388001-242388883)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               eye (0.170503)
               

               
               lyg (0.133103)
               

               
               jca (0.11396)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)
               

               
               lyg (0.133103)
               

               
               jca (0.11396)

	103-781, gnl\|bosTau2\|chr14 (8172559-8173250)
	103-781, gnl\|Hg17\|chr2 (242388001-242388883)