Non-Coding RNA Search

Ss1.1-rmcp05c_g22.5

Sequence:


               
               ACCTAGGAAAAGCAAGAATCTGCACCTGCCAGATCATTTGGGCAGATGACTTGTTTGCTC
TTTAAACCCTGTTGTCAATAAAGGAAATACCCTGTTGTGTATCATATAGAGACAGAGGTG
GTGTTTTATTAATTCAGGTCTTTAATCTAGGGCTTTTATGAAAAAAAAAGTGTTATTTGT
TTGTTTGTGGTTTATTTATTCATTCAATTGTGTTACTGAGGCCAGTGGTGACCAAGTAGC
TCAGTTGATGAGCAGAGGTATGGGGCTGCTGAGGTCCAGACTGGAGGTCAGTAGGAAGTG
TCAGCCCATTCGATGGTCACTTGTAATCCTAGCCTAATGAGTGGTTTTGAAAGTGGATGT
CATTGTCCAGGCACTACTGAGTGGTTGGAACCACATGAGGTCATCATTGCCCTGGGAAAA
GCAGCTTTAAAGACATGCTAACTATAGGTCTTTTAAAATGACTGTCATTTGGTTAAGGAG
ATTTGCTGGACATGAGCATAATCTGGCAATAACATCTCCATCTCTTTTTTCTTTTTTTTT
TTTTTCCCCTATGATCAGTATCCCTGAAATACTGGTTAGCTTCTTTCCAACAAAACTGTG
GTCAAAGGAGAATGCTGGGCAATGCTGATTTTAGCAAAAGCTTAGTTTAAAAAAAGAAAA
AAAAAAAAGTGGCTTGGTGCAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCTAGGAAAAGCAAGAATCTGCACCTGCCAGATCATTTGGGCAGATGACTTGTTTGCTC
TTTAAACCCTGTTGTCAATAAAGGAAATACCCTGTTGTGTATCATATAGAGACAGAGGTG
GTGTTTTATTAATTCAGGTCTTTAATCTAGGGCTTTTATGAAAAAAAAAGTGTTATTTGT
TTGTTTGTGGTTTATTTATTCATTCAATTGTGTTACTGAGGCCAGTGGTGACCAAGTAGC
TCAGTTGATGAGCAGAGGTATGGGGCTGCTGAGGTCCAGACTGGAGGTCAGTAGGAAGTG
TCAGCCCATTCGATGGTCACTTGTAATCCTAGCCTAATGAGTGGTTTTGAAAGTGGATGT
CATTGTCCAGGCACTACTGAGTGGTTGGAACCACATGAGGTCATCATTGCCCTGGGAAAA
GCAGCTTTAAAGACATGCTAACTATAGGTCTTTTAAAATGACTGTCATTTGGTTAAGGAG
ATTTGCTGGACATGAGCATAATCTGGCAATAACATCTCCATCTCTTTTTTCTTTTTTTTT
TTTTTCCCCTATGATCAGTATCCCTGAAATACTGGTTAGCTTCTTTCCAACAAAACTGTG
GTCAAAGGAGAATGCTGGGCAATGCTGATTTTAGCAAAAGCTTAGTTTAAAAAAAGAAAA
AAAAAAAAGTGGCTTGGTGCAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               23-653, gnl|bosTau2|chr15 (14708651-14708016)
               

               
               23-653, gnl|Hg17|chr11 (119708094-119709083)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-653, gnl|bosTau2|chr15 (14708651-14708016)
               

               
               23-653, gnl|Hg17|chr11 (119708094-119709083)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               sto (0.179824)
               

               
               gul (0.177588)
               

               
               mcp (0.170648)
               

               
               csk (0.140746)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sto (0.179824)
               

               
               gul (0.177588)
               

               
               mcp (0.170648)
               

               
               csk (0.140746)

	23-653, gnl\|bosTau2\|chr15 (14708651-14708016)
	23-653, gnl\|Hg17\|chr11 (119708094-119709083)