Non-Coding RNA Search

Ss1.1-rmcp06c_a19.5

Sequence:


               
               AAACTGGCTGTGAAACTCTGCTTTGGGCCCTGCAACTCCTATCAATATCGCCTGGTTGGA
CCTGGGCAATGGAATAGGAGCCAGGAATGCCATCTTCACCCAAAAACAAAGGATACTGAA
GCCTTTAAAGACACGAGCTCTAAAAACTTCATCTAATCTCCCAGCTTTCTTTCTGTTGAA
AATCCTGGGGCTTCTTGCTGTTGTGGTGGCCTTTTTTTTCCAACTTCAGTGGTTCTAATC
TGTCCACACAATGCTTTTAGCTTTATCATCAGTCAGTACTTCTTAAAGAAAAAAGGTAAA
AGGAAAAATATTAAATCTAAATTCTAAATTTTATAGCTGAGAGGAACAGTGGGAGAGGCA
GATGTGGAGAGTTAGCAGAATTAGGTCTATTTATAAAACTGAAATAGTGTCAGGAAATAT
CTATTCCATTCTACCCTTCCCTCAAGTTCATCAGATTCTCCAAAATGCACAGTAAAATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAACTGGCTGTGAAACTCTGCTTTGGGCCCTGCAACTCCTATCAATATCGCCTGGTTGGA
CCTGGGCAATGGAATAGGAGCCAGGAATGCCATCTTCACCCAAAAACAAAGGATACTGAA
GCCTTTAAAGACACGAGCTCTAAAAACTTCATCTAATCTCCCAGCTTTCTTTCTGTTGAA
AATCCTGGGGCTTCTTGCTGTTGTGGTGGCCTTTTTTTTCCAACTTCAGTGGTTCTAATC
TGTCCACACAATGCTTTTAGCTTTATCATCAGTCAGTACTTCTTAAAGAAAAAAGGTAAA
AGGAAAAATATTAAATCTAAATTCTAAATTTTATAGCTGAGAGGAACAGTGGGAGAGGCA
GATGTGGAGAGTTAGCAGAATTAGGTCTATTTATAAAACTGAAATAGTGTCAGGAAATAT
CTATTCCATTCTACCCTTCCCTCAAGTTCATCAGATTCTCCAAAATGCACAGTAAAATAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-465, gnl|bosTau2|chr16 (27038826-27039288)
               

               
               1-465, gnl|Hg17|chr1 (167909706-167910178)
               

               
               1-465, gnl|Mm7|chr1 (162837969-162837528)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-465, gnl|bosTau2|chr16 (27038826-27039288)
               

               
               1-465, gnl|Hg17|chr1 (167909706-167910178)
               

               
               1-465, gnl|Mm7|chr1 (162837969-162837528)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               mcp (0.341297)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.341297)

	1-465, gnl\|bosTau2\|chr16 (27038826-27039288)
	1-465, gnl\|Hg17\|chr1 (167909706-167910178)
	1-465, gnl\|Mm7\|chr1 (162837969-162837528)