Non-Coding RNA Search

Ss1.1-rmcp06c_e21.5

Sequence:


               
               TCAATTTTTGTGTACTGATTCTTTTGTGGATCCAGGTAATCTCACGGACTCAAACTGGCA
CGCATTAACCAACACCCACACCCCTTCACCAACAGGCTCAACAGCCCCCTGAGCAAGTGT
GATGAGAAACGTTGCTGACCTGGCATCCTGGGGGGAACTGGCTGCCTGGCACGCATGCTC
CAGCTCCTCTAAGGTCTTCTGGGGAAATCCATAAACCATTGAAGTCTTTTTTGTTGACAT
CCCACAGCCTACTTAAGGGCGGGATGCCCAGATTTTTGTAGGGGCCAGCTGACCAATTTA
CCTAAAAATGTGTCAGCAGGATTCACTATTCCCAAGCTGTCTGCAGTTTTTTTCCTTCCC
TCTTATAAATCCTGATTTTTTCCCTCTCTTCTTGGACTCACTCTACCAATGGACTCCTCC
TATGTGAACAAACAGTGTCAATCAGAGGACCAAGCTACGAAAAGTGACCAGATGCCTCAT
TCAAGTTGTTCTTTGAAGCCTGCCAACTGGCAAATGCACACGCAATGCCTGTTGGTTGTC
ACTCTGTGTGTGTGTAGTGTGTGTATATATTACACACACTCTGCGTGTGTGTATATATTA
ATACACACATACATAGAATCTATCATACAAATGGCCACCCTCATAAAAATAAAGCACTGC
AGGTGTGGCTTCCCAAGCTTTCTGATCAGGCCAGATTTGCACGAATTTGGGGTCATTTGA
TCAAAGTGTGTCCCCACTGCCCCCATTCCTAAGAGCTCCTTCATGGCTAAGATGTCCAAG
AGCCCCTGGACCATGGCTACCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAATTTTTGTGTACTGATTCTTTTGTGGATCCAGGTAATCTCACGGACTCAAACTGGCA
CGCATTAACCAACACCCACACCCCTTCACCAACAGGCTCAACAGCCCCCTGAGCAAGTGT
GATGAGAAACGTTGCTGACCTGGCATCCTGGGGGGAACTGGCTGCCTGGCACGCATGCTC
CAGCTCCTCTAAGGTCTTCTGGGGAAATCCATAAACCATTGAAGTCTTTTTTGTTGACAT
CCCACAGCCTACTTAAGGGCGGGATGCCCAGATTTTTGTAGGGGCCAGCTGACCAATTTA
CCTAAAAATGTGTCAGCAGGATTCACTATTCCCAAGCTGTCTGCAGTTTTTTTCCTTCCC
TCTTATAAATCCTGATTTTTTCCCTCTCTTCTTGGACTCACTCTACCAATGGACTCCTCC
TATGTGAACAAACAGTGTCAATCAGAGGACCAAGCTACGAAAAGTGACCAGATGCCTCAT
TCAAGTTGTTCTTTGAAGCCTGCCAACTGGCAAATGCACACGCAATGCCTGTTGGTTGTC
ACTCTGTGTGTGTGTAGTGTGTGTATATATTACACACACTCTGCGTGTGTGTATATATTA
ATACACACATACATAGAATCTATCATACAAATGGCCACCCTCATAAAAATAAAGCACTGC
AGGTGTGGCTTCCCAAGCTTTCTGATCAGGCCAGATTTGCACGAATTTGGGGTCATTTGA
TCAAAGTGTGTCCCCACTGCCCCCATTCCTAAGAGCTCCTTCATGGCTAAGATGTCCAAG
AGCCCCTGGACCATGGCTACCTTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               166-542, gnl|bosTau2|chr21 (14835635-14836017)
               

               
               166-542, gnl|Hg17|chr15 (87220227-87219868)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               166-542, gnl|bosTau2|chr21 (14835635-14836017)
               

               
               166-542, gnl|Hg17|chr15 (87220227-87219868)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               hlv (0.278513)
               

               
               mcp (0.170648)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hlv (0.278513)
               

               
               mcp (0.170648)

	166-542, gnl\|bosTau2\|chr21 (14835635-14836017)
	166-542, gnl\|Hg17\|chr15 (87220227-87219868)