Non-Coding RNA Search

Ss1.1-rmcp08c_d14.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAGAAAAAAAAAAGTTTTTTGTTT
TTTTTTTATTTTGTGGAAAACAAAATCAGAAAAACTAAAACCCCAAACTCCAGAAAAAAT
CCTAAAAAATACGTTTTTTCTTAAAAAATACTGTATAAGTCTCTACTCCTCTCCCTCCCC
CCAAACAGCCCTTCTCATGTCCTCTCATCTAAGTGCXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXGTTTGTCCCGTTTGATCTCCCGGCAGCCTGGCCGCCGGGTACCCCTCT
GCTTCCTGCTTTGTACACGGGAGACAGAAGTCCTGCACCCAGTTAGTGTGCGGAGGTGGG
ATTTGAACCCGGTGCCCTCTGTCCACCTCGGGGAGGGCCAGCCTCATGGAGCAAGGAAGG
CCCCTGGCCTCCCCCTCCTGGACACGCCGCCGCCCTCCCTCGCTCCGTGTTCTCAGGCTC
TGCGGCTGCCACATCTGTGCCCGCGAAAGAGGTTCAGGAGTGACTGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAGAAAAAAAAAAGTTTTTTGTTT
TTTTTTTATTTTGTGGAAAACAAAATCAGAAAAACTAAAACCCCAAACTCCAGAAAAAAT
CCTAAAAAATACGTTTTTTCTTAAAAAATACTGTATAAGTCTCTACTCCTCTCCCTCCCC
CCAAACAGCCCTTCTCATGTCCTCTCATCTAAGTGCXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXGTTTGTCCCGTTTGATCTCCCGGCAGCCTGGCCGCCGGGTACCCCTCT
GCTTCCTGCTTTGTACACGGGAGACAGAAGTCCTGCACCCAGTTAGTGTGCGGAGGTGGG
ATTTGAACCCGGTGCCCTCTGTCCACCTCGGGGAGGGCCAGCCTCATGGAGCAAGGAAGG
CCCCTGGCCTCCCCCTCCTGGACACGCCGCCGCCCTCCCTCGCTCCGTGTTCTCAGGCTC
TGCGGCTGCCACATCTGTGCCCGCGAAAGAGGTTCAGGAGTGACTGCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               94-313, gnl|bosTau2|chr23 (23494795-23495010)
               

               
               94-313, gnl|Hg17|chr6 (31974818-31975040)
               

               
               94-313, gnl|Mm7|chr17 (32993578-32993369)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               94-313, gnl|bosTau2|chr23 (23494795-23495010)
               

               
               94-313, gnl|Hg17|chr6 (31974818-31975040)
               

               
               94-313, gnl|Mm7|chr17 (32993578-32993369)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               elu (0.385356)
               

               
               mcp (0.170648)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)
               

               
               mcp (0.170648)

	94-313, gnl\|bosTau2\|chr23 (23494795-23495010)
	94-313, gnl\|Hg17\|chr6 (31974818-31975040)
	94-313, gnl\|Mm7\|chr17 (32993578-32993369)