Ss1.1-rmcp09c_f12.5
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
AGGCACTGCGTCAGTGGCTGGCACCCGCCTCCCGCCGCAGCTCCCGCCGCCTCTATGCAC AGGCCCAGAAGCTGCGGAAGCACAGCGACCACCTCTTCACAGCCACCATCCCCCTGCAAG GCACGAGCGACTCCTGGTACCAAGAGCTCAAGGCTATCATCAGGGAGCAGCAGACTCGGC CCATCTGGACAGCTGAGGACCAGCTGGACAGCTCTTCAGAGGACAACCTGGACCTCCCCC ACCGTGACCTGGCTGACAGCTCTGCGGATCTGAGCTGTGACAGCCGCGTCAACAGTGACT ATGAGACAGACGGCGAGGGCTACACGGATGGCGAGGGTGGGCCTTACACAGACGTGGATG AGGAGCCCCCGGCACCAGCCCTGGCCCGGTCCTCTGAGCCCGTGCTGGCGGATGAGCCCC AGATCCTGCAGGATCATGGAAGACCCTCAGGTCACCAGGCACCCCAGGTGGATGGCCGCC ACCCACAGGGTCAGTGGCGACAGGACAGCATGCGGACATATGGGCAGGATGCGCTGAGAA AAAAGTTTACACGAGCCCGAGATGTGGAGTCTTCAGATGATGACAGCTACAACTGGGGCC CGGCCACTGACCTGTGACCCTTCCCAGATGGCCAGCTGGCCTGTCCTC |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
AGGCACTGCGTCAGTGGCTGGCACCCGCCTCCCGCCGCAGCTCCCGCCGCCTCTATGCAC AGGCCCAGAAGCTGCGGAAGCACAGCGACCACCTCTTCACAGCCACCATCCCCCTGCAAG GCACGAGCGACTCCTGGTACCAAGAGCTCAAGGCTATCATCAGGGAGCAGCAGACTCGGC CCATCTGGACAGCTGAGGACCAGCTGGACAGCTCTTCAGAGGACAACCTGGACCTCCCCC ACCGTGACCTGGCTGACAGCTCTGCGGATCTGAGCTGTGACAGCCGCGTCAACAGTGACT ATGAGACAGACGGCGAGGGCTACACGGATGGCGAGGGTGGGCCTTACACAGACGTGGATG AGGAGCCCCCGGCACCAGCCCTGGCCCGGTCCTCTGAGCCCGTGCTGGCGGATGAGCCCC AGATCCTGCAGGATCATGGAAGACCCTCAGGTCACCAGGCACCCCAGGTGGATGGCCGCC ACCCACAGGGTCAGTGGCGACAGGACAGCATGCGGACATATGGGCAGGATGCGCTGAGAA AAAAGTTTACACGAGCCCGAGATGTGGAGTCTTCAGATGATGACAGCTACAACTGGGGCC CGGCCACTGACCTGTGACCCTTCCCAGATGGCCAGCTGGCCTGTCCTC |
Coded protein: 1 entry(ies) | More info |
Aligned organism(s): 34 entry(ies) | More info |
Aligned organism(s): 34 entry(ies) | Help | Less info |
89-203, gnl|bosTau2|chr7 (17630142-17630256) | |
89-203, gnl|Hg17|chr19 (3697760-3697874) | |
89-203, gnl|Mm7|chr10 (81066497-81066380) | |
306-470, gnl|bosTau2|chr7 (17630767-17630931) | |
306-470, gnl|canFam2|chr20 (58786559-58786446) | |
306-470, gnl|danRer3|chr10 (647390-647505) | |
306-470, gnl|dasNov1|scaffold_53236 (10613-10494) | |
306-470, gnl|echTel1|scaffold_294814 (29432-29605) | |
306-470, gnl|fr1|chrUn (135794468-135794320) | |
306-470, gnl|galGal2|chr28 (882997-882890) | |
306-470, gnl|hg17|chr19 (3698900-3699043) | |
306-470, gnl|Hg17|chr19 (3698918-3699082) | |
306-470, gnl|loxAfr1|scaffold_48134 (18295-18400) | |
306-470, gnl|mm7|chr10 (81065960-81065841) | |
306-470, gnl|monDom2|scaffold_85 (278622-278729) | |
306-470, gnl|oryCun1|scaffold_127481 (45171-45069) | |
306-470, gnl|panTro1|chr20 (3926131-3926274) | |
306-470, gnl|rheMac2|chr19 (3587847-3587990) | |
306-470, gnl|rn3|chr7 (9929321-9929440) | |
306-470, gnl|tetNig1|chr1_random (3160348-3160204) | |
306-470, gnl|xenTro1|scaffold_910 (327995-327883) | |
514-648, gnl|bosTau2|chr7 (17632336-17632471) | |
514-648, gnl|canFam2|chr20 (58785314-58785181) | |
514-648, gnl|dasNov1|scaffold_53236 (9433-9300) | |
514-648, gnl|galGal2|chr28 (882484-882373) | |
514-648, gnl|hg17|chr19 (3701556-3701689) | |
514-648, gnl|Hg17|chr19 (3701579-3701713) | |
514-648, gnl|loxAfr1|scaffold_60470 (11013-10881) | |
514-648, gnl|mm7|chr10 (81065412-81065280) | |
514-648, gnl|monDom2|scaffold_85 (279671-279804) | |
514-648, gnl|panTro1|chr20 (3928788-3928921) | |
514-648, gnl|rheMac2|chr19 (3590215-3590348) | |
514-648, gnl|rn3|chr7 (9929857-9929988) | |
514-648, gnl|xenTro1|scaffold_910 (324415-324287) |
Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
89-203, gnl|bosTau2|chr7 (17630142-17630256) | |
89-203, gnl|Hg17|chr19 (3697760-3697874) | |
89-203, gnl|Mm7|chr10 (81066497-81066380) | |
306-470, gnl|bosTau2|chr7 (17630767-17630931) | |
306-470, gnl|canFam2|chr20 (58786559-58786446) | |
306-470, gnl|danRer3|chr10 (647390-647505) | |
306-470, gnl|dasNov1|scaffold_53236 (10613-10494) | |
306-470, gnl|echTel1|scaffold_294814 (29432-29605) | |
306-470, gnl|fr1|chrUn (135794468-135794320) | |
306-470, gnl|galGal2|chr28 (882997-882890) | |
306-470, gnl|hg17|chr19 (3698900-3699043) | |
306-470, gnl|Hg17|chr19 (3698918-3699082) | |
306-470, gnl|loxAfr1|scaffold_48134 (18295-18400) | |
306-470, gnl|mm7|chr10 (81065960-81065841) | |
306-470, gnl|monDom2|scaffold_85 (278622-278729) | |
306-470, gnl|oryCun1|scaffold_127481 (45171-45069) | |
306-470, gnl|panTro1|chr20 (3926131-3926274) | |
306-470, gnl|rheMac2|chr19 (3587847-3587990) | |
306-470, gnl|rn3|chr7 (9929321-9929440) | |
306-470, gnl|tetNig1|chr1_random (3160348-3160204) | |
306-470, gnl|xenTro1|scaffold_910 (327995-327883) | |
514-648, gnl|bosTau2|chr7 (17632336-17632471) | |
514-648, gnl|canFam2|chr20 (58785314-58785181) | |
514-648, gnl|dasNov1|scaffold_53236 (9433-9300) | |
514-648, gnl|galGal2|chr28 (882484-882373) | |
514-648, gnl|hg17|chr19 (3701556-3701689) | |
514-648, gnl|Hg17|chr19 (3701579-3701713) | |
514-648, gnl|loxAfr1|scaffold_60470 (11013-10881) | |
514-648, gnl|mm7|chr10 (81065412-81065280) | |
514-648, gnl|monDom2|scaffold_85 (279671-279804) | |
514-648, gnl|panTro1|chr20 (3928788-3928921) | |
514-648, gnl|rheMac2|chr19 (3590215-3590348) | |
514-648, gnl|rn3|chr7 (9929857-9929988) | |
514-648, gnl|xenTro1|scaffold_910 (324415-324287) |
Expressed library(ies): 3 entry(ies) | More info |
Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
cov (0.264306) | |
mcp (0.170648) | |
ute (0.132784) |