Non-Coding RNA Search

Ss1.1-rmcp09c_l3.5

Sequence:


               
               CTGCAGGAATCGGACGAGGGAGAACTAATGTCTGTCGTGCTGCGTGATCTCTTCAGTGTC
ACTCTGTACCCTCCACATATACCCCTTTGTGCGATAAAAAAAAAAAAAAGAATCGTACGT
CGACTTCCAATTTTTCACAGCCTCAGCCTAGCGAAAATGGTCCATGGGATAAACAGCTGG
TATTTGTATCAAAAACTCAGATGGGTCACATCAATGCCACGGCATTCCCAAATTTTGATT
TCGATTAACATGGACAGGATTACTGTGTTTAATTTTTTAAAAAACTGAACACTGTGATTA
TGGGGTTTGGTAATTTAGCAGAACTCTTACTGGTAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCAGGAATCGGACGAGGGAGAACTAATGTCTGTCGTGCTGCGTGATCTCTTCAGTGTC
ACTCTGTACCCTCCACATATACCCCTTTGTGCGATAAAAAAAAAAAAAAGAATCGTACGT
CGACTTCCAATTTTTCACAGCCTCAGCCTAGCGAAAATGGTCCATGGGATAAACAGCTGG
TATTTGTATCAAAAACTCAGATGGGTCACATCAATGCCACGGCATTCCCAAATTTTGATT
TCGATTAACATGGACAGGATTACTGTGTTTAATTTTTTAAAAAACTGAACACTGTGATTA
TGGGGTTTGGTAATTTAGCAGAACTCTTACTGGTAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               20-336, gnl|bosTau2|chr13 (55854366-55854041)
               

               
               20-336, gnl|Hg17|chr20 (42968485-42968812)
               

               
               20-336, gnl|Mm7|chr2 (163757607-163757922)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               20-336, gnl|bosTau2|chr13 (55854366-55854041)
               

               
               20-336, gnl|Hg17|chr20 (42968485-42968812)
               

               
               20-336, gnl|Mm7|chr2 (163757607-163757922)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ebs (0.236602)
               

               
               fty (0.17584)
               

               
               mcp (0.170648)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.236602)
               

               
               fty (0.17584)
               

               
               mcp (0.170648)

	20-336, gnl\|bosTau2\|chr13 (55854366-55854041)
	20-336, gnl\|Hg17\|chr20 (42968485-42968812)
	20-336, gnl\|Mm7\|chr2 (163757607-163757922)