Ss1.1-rmcp13c_i21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAATAAAAATGACATTAAAGGAGGAATTCGGCGTTGGAACTACTTTTTCCCAGAGGAATT ACTGGTTTATGATATTTGTAAATATCGCTGGTGTGAAAACATCGGAAGAGCCCACAAGAG TAATAATATCATGATTTTGGTTGACCTAAAAAATGAAGTTTGGTATCAAAAATGCCATGA CCCTGTATGCAAAGCAGAAAACTTCAAATCTAACTGTTTCCCATTACCGCCTGAAGTATG TCTCCTGTCTCTTCTCAAAGAAGAAGAGGAGTTTACAACAGATGAAACAGCAAACAAGGA AACCAGGAATCCTTATGAAGCACCATCCAGAGCATTGTCAAAAGGTACATTTTCTGATGT TGACTGGGATAATAGCATTGATGACACTTATTTTTTGGAGGCTACAGAAGATGCTGAATT GGTAGAAGCTGCAGAGAACAGTCTTCTCGGTTATGATGGAGTAGATGAAATTCCTGATGA ACTAATTATAGAAGTATTACAAGAGTAGCTAATTATGGACATTTATATAACCAGGCTATG ATTTGCTTCAAGAGCGATTTAATAACATAGTAACTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAATAAAAATGACATTAAAGGAGGAATTCGGCGTTGGAACTACTTTTTCCCAGAGGAATT ACTGGTTTATGATATTTGTAAATATCGCTGGTGTGAAAACATCGGAAGAGCCCACAAGAG TAATAATATCATGATTTTGGTTGACCTAAAAAATGAAGTTTGGTATCAAAAATGCCATGA CCCTGTATGCAAAGCAGAAAACTTCAAATCTAACTGTTTCCCATTACCGCCTGAAGTATG TCTCCTGTCTCTTCTCAAAGAAGAAGAGGAGTTTACAACAGATGAAACAGCAAACAAGGA AACCAGGAATCCTTATGAAGCACCATCCAGAGCATTGTCAAAAGGTACATTTTCTGATGT TGACTGGGATAATAGCATTGATGACACTTATTTTTTGGAGGCTACAGAAGATGCTGAATT GGTAGAAGCTGCAGAGAACAGTCTTCTCGGTTATGATGGAGTAGATGAAATTCCTGATGA ACTAATTATAGAAGTATTACAAGAGTAGCTAATTATGGACATTTATATAACCAGGCTATG ATTTGCTTCAAGAGCGATTTAATAACATAGTAACTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 22-133, gnl|bosTau2|chr27 (10014997-10015108) | |
| 22-133, gnl|canFam2|chr16 (48828899-48828745) | |
| 22-133, gnl|danRer3|chr1 (18941153-18941333) | |
| 22-133, gnl|echTel1|scaffold_181563 (2726-2880) | |
| 22-133, gnl|fr1|chrUn (86492177-86492342) | |
| 22-133, gnl|galGal2|chr4 (40094771-40094617) | |
| 22-133, gnl|hg17|chr4 (185981840-185981994) | |
| 22-133, gnl|Hg17|chr4 (185981877-185981988) | |
| 22-133, gnl|loxAfr1|scaffold_79635 (5384-5230) | |
| 22-133, gnl|mm7|chr8 (45364360-45364207) | |
| 22-133, gnl|Mm7|chr8 (45364322-45364211) | |
| 22-133, gnl|monDom2|scaffold_9 (66788305-66788459) | |
| 22-133, gnl|oryCun1|scaffold_175652 (38165-38317) | |
| 22-133, gnl|panTro1|chr3 (204187487-204187641) | |
| 22-133, gnl|rheMac2|chr5 (176783638-176783792) | |
| 22-133, gnl|rn3|chr16 (48991900-48992052) | |
| 22-133, gnl|tetNig1|chr18 (5594395-5594244) | |
| 22-133, gnl|xenTro1|scaffold_99 (1835807-1835968) | |
| 265-568, gnl|bosTau2|chr27 (10022189-10022492) | |
| 265-568, gnl|canFam2|chr16 (48822307-48822577) | |
| 265-568, gnl|hg17|chr11 (13736152-13736433) | |
| 265-568, gnl|Hg17|chr4 (185990827-185991146) | |
| 265-568, gnl|mm7|chr8 (45356725-45356987) | |
| 265-568, gnl|Mm7|chr8 (45357033-45356732) | |
| 265-568, gnl|oryCun1|scaffold_208211 (122738-122495) | |
| 265-568, gnl|panTro1|chr9 (13949630-13949911) | |
| 265-568, gnl|rheMac2|chr5 (176791610-176791334) | |
| 265-568, gnl|rn3|chr16 (48997177-48996927) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 22-133, gnl|bosTau2|chr27 (10014997-10015108) | |
| 22-133, gnl|canFam2|chr16 (48828899-48828745) | |
| 22-133, gnl|danRer3|chr1 (18941153-18941333) | |
| 22-133, gnl|echTel1|scaffold_181563 (2726-2880) | |
| 22-133, gnl|fr1|chrUn (86492177-86492342) | |
| 22-133, gnl|galGal2|chr4 (40094771-40094617) | |
| 22-133, gnl|hg17|chr4 (185981840-185981994) | |
| 22-133, gnl|Hg17|chr4 (185981877-185981988) | |
| 22-133, gnl|loxAfr1|scaffold_79635 (5384-5230) | |
| 22-133, gnl|mm7|chr8 (45364360-45364207) | |
| 22-133, gnl|Mm7|chr8 (45364322-45364211) | |
| 22-133, gnl|monDom2|scaffold_9 (66788305-66788459) | |
| 22-133, gnl|oryCun1|scaffold_175652 (38165-38317) | |
| 22-133, gnl|panTro1|chr3 (204187487-204187641) | |
| 22-133, gnl|rheMac2|chr5 (176783638-176783792) | |
| 22-133, gnl|rn3|chr16 (48991900-48992052) | |
| 22-133, gnl|tetNig1|chr18 (5594395-5594244) | |
| 22-133, gnl|xenTro1|scaffold_99 (1835807-1835968) | |
| 265-568, gnl|bosTau2|chr27 (10022189-10022492) | |
| 265-568, gnl|canFam2|chr16 (48822307-48822577) | |
| 265-568, gnl|hg17|chr11 (13736152-13736433) | |
| 265-568, gnl|Hg17|chr4 (185990827-185991146) | |
| 265-568, gnl|mm7|chr8 (45356725-45356987) | |
| 265-568, gnl|Mm7|chr8 (45357033-45356732) | |
| 265-568, gnl|oryCun1|scaffold_208211 (122738-122495) | |
| 265-568, gnl|panTro1|chr9 (13949630-13949911) | |
| 265-568, gnl|rheMac2|chr5 (176791610-176791334) | |
| 265-568, gnl|rn3|chr16 (48997177-48996927) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mcp (0.170648) |