Non-Coding RNA Search

Ss1.1-rmcp21c_i14.5.5

Sequence:


               
               AGGCTTCCTTATAGGTTTGGTGCAGTCCTGCTTTCTGCAAAGGCCAGTGAAGGTGACTTC
CGAGAGTTCAGTGCATTAAGGAAAACAAGCAGGAAGAAACATGTTTAAAAAGGTAAAAAA
GAAAAAAAAGTGCTTGAAAATAATTCTCGGGGACGGATCTGGAGGGGGAAGCCCTGTGTG
CGGTGTGCCCTGTCCGCTGACTCCTGCCCGGCCGGCCGCACAAAGCCCTCCAAGGTCCAG
GCTCCCGAGCAGGGCCGGTGGGAAAAGCCTTTCCTTTAGGGGAAGCAACCTTTGCTGCAG
TGGTTTCCAGGGGGGAGTTGTATTCCTTGACCTGTGGCCCCTCCACCTCGGCCTCGGAGG
CCTTACAACTTTTTGGCACTGTCGTGGCACGCCGCGGCCCGGAGGGTGGTGCCAGCCAAG
CCCCGGCTGCTGACCCGCCGGACCAGCACTTTGGACACTGGGATTTTTGTTCTGGGCAGC
TCGCTCCGGGCTGGCTGCTGGTGCACCACCGGGTGGCTGGATGGAAGGTTCGCGAGGTGC
TTGATGCTGATGGGGATCTTGGAGTCCTTCAGCAAGCTTCCCGGCGTTCGCAGGGGACAG
GTGACGGTGACCGGGGACACTGGCTTCAACCGGGACAAGCAGGACGTCTCCTCGCCGGCG
GGCAGGGCTGCGGGGCTTCCATCGGGCTCGGCGTAGAGGTCGTAGAGCGCGTCGCCGCTG
TCGCTGTCCCGGGGGAGGCCCACCTTCCTCGCGCCGTCCTCCTCGGGCCCGGGGGTGGTG
GAGTCCCAGTAGCCCTCGTCGCTGTTGGGGACGCCTTCCTGCGGCTCCTTGTCCGGCTGC
TTGGGCTCCTCCTTCGGCTGGAGCTCGGCGGGGATCCGCTGGACCCTCCTGCGCTTGACC
GAGGACGCCTCCTTGGCCCCCTCCGCACACCTGGCGTCTTTGGGGGTCTCGGGTGGCACC
TGCGCTTCCGGCGCCGCCGCCGCCGCCGCCGCCGTGGCCGCTCCCTCCTGGGGCCCCTGT
CCCTGGTCCTCGGTCTGGGAGAGCATGTCCCAGAACTCCTGCACGTAGGAGTCGTCCGCC
TCGGCCGGGCTCGCCATCTCCTCCCCGCCTCCCTGGTAGGCCACCACGCCGGGGGGCTTT
TTGGCGGGGCCCGGCTGGCCCGGCCCGGGGGCATGCTTGGCACAGCTGGGCCCTGCCTCG
TCCTCGGGGTCTGCGATAATATCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGCTTCCTTATAGGTTTGGTGCAGTCCTGCTTTCTGCAAAGGCCAGTGAAGGTGACTTC
CGAGAGTTCAGTGCATTAAGGAAAACAAGCAGGAAGAAACATGTTTAAAAAGGTAAAAAA
GAAAAAAAAGTGCTTGAAAATAATTCTCGGGGACGGATCTGGAGGGGGAAGCCCTGTGTG
CGGTGTGCCCTGTCCGCTGACTCCTGCCCGGCCGGCCGCACAAAGCCCTCCAAGGTCCAG
GCTCCCGAGCAGGGCCGGTGGGAAAAGCCTTTCCTTTAGGGGAAGCAACCTTTGCTGCAG
TGGTTTCCAGGGGGGAGTTGTATTCCTTGACCTGTGGCCCCTCCACCTCGGCCTCGGAGG
CCTTACAACTTTTTGGCACTGTCGTGGCACGCCGCGGCCCGGAGGGTGGTGCCAGCCAAG
CCCCGGCTGCTGACCCGCCGGACCAGCACTTTGGACACTGGGATTTTTGTTCTGGGCAGC
TCGCTCCGGGCTGGCTGCTGGTGCACCACCGGGTGGCTGGATGGAAGGTTCGCGAGGTGC
TTGATGCTGATGGGGATCTTGGAGTCCTTCAGCAAGCTTCCCGGCGTTCGCAGGGGACAG
GTGACGGTGACCGGGGACACTGGCTTCAACCGGGACAAGCAGGACGTCTCCTCGCCGGCG
GGCAGGGCTGCGGGGCTTCCATCGGGCTCGGCGTAGAGGTCGTAGAGCGCGTCGCCGCTG
TCGCTGTCCCGGGGGAGGCCCACCTTCCTCGCGCCGTCCTCCTCGGGCCCGGGGGTGGTG
GAGTCCCAGTAGCCCTCGTCGCTGTTGGGGACGCCTTCCTGCGGCTCCTTGTCCGGCTGC
TTGGGCTCCTCCTTCGGCTGGAGCTCGGCGGGGATCCGCTGGACCCTCCTGCGCTTGACC
GAGGACGCCTCCTTGGCCCCCTCCGCACACCTGGCGTCTTTGGGGGTCTCGGGTGGCACC
TGCGCTTCCGGCGCCGCCGCCGCCGCCGCCGCCGTGGCCGCTCCCTCCTGGGGCCCCTGT
CCCTGGTCCTCGGTCTGGGAGAGCATGTCCCAGAACTCCTGCACGTAGGAGTCGTCCGCC
TCGGCCGGGCTCGCCATCTCCTCCCCGCCTCCCTGGTAGGCCACCACGCCGGGGGGCTTT
TTGGCGGGGCCCGGCTGGCCCGGCCCGGGGGCATGCTTGGCACAGCTGGGCCCTGCCTCG
TCCTCGGGGTCTGCGATAATATCT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q8N785_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q8N785_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-674, gnl|bosTau2|chr12 (18739492-18738838)
               

               
               3-674, gnl|Hg17|chr13 (24641381-24642050)
               

               
               3-674, gnl|Mm7|chr14 (55248077-55247359)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-674, gnl|bosTau2|chr12 (18739492-18738838)
               

               
               3-674, gnl|Hg17|chr13 (24641381-24642050)
               

               
               3-674, gnl|Mm7|chr14 (55248077-55247359)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               ebs (0.236602)
               

               
               mcp (0.170648)
               

               
               ecc (0.115035)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.236602)
               

               
               mcp (0.170648)
               

               
               ecc (0.115035)

	3-674, gnl\|bosTau2\|chr12 (18739492-18738838)
	3-674, gnl\|Hg17\|chr13 (24641381-24642050)
	3-674, gnl\|Mm7\|chr14 (55248077-55247359)