Ss1.1-rmcp25c_i14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGTCTGTGTTTATGGAGGAACAGGAATCAGTGAGCAGATTGCTGAGCTGAAAAGAGGTG CTGAAATTATTGTTTGCACACCTGGTCGAATGATTGACATGTTAGCAGCTAACAGTGGTC GGGTTACAAATCTTCGAAGAGTGACATATGTTGTTTTAGATGAAGCAGACAGAATGTTTG ACATGGGTTTTGAACCACAGGTCATGCGCATTGTGGACAATGTTCGTCCTGATCGACAGA CAGTTATGTTTTCAGCTACTTTCCCCAGAGCTATGGAAGCCTTGGCTCGCAGGATCCTGA GTAAACCCATTGAAGTGCAGGTTGGAGGCAGAAGCGTGGTTTGCTCAGATGTGGAGCAGC AAGTGATTGTGATTGAAGAGGAAAAGAAATTCTTGAAGCTGCTTGAGCTTCTAGGCCATT ATCAAGAATCAGGATCTGTCATCATATTTGTGGATAAGCAGGAACATGCTGATGGTCTTC TGAAAGATTTAATGAGAGCTTCTTACCCTTGCATGTCTCTTCATGGAGGCATTGATCAAT ATGACAGAGATAGCATCATAAATGATTTTAAGAATGGGACCTGCAAACTTCTTGTGGCTA CCTCTGTTGCTGCCCGAGGCCTGGATGTGAAACATCTGATTCTTGTGGTAAATTATAGCT GCCCCAACCATTATGAGGATTATGTGCACAGAGCAGGACGGACTGGAAGAGCAGGCAACA AGGGTTATGCATATACCTTTATCACAGAAGATCAAGCTCGGTATGCCGGTGACATAATTA AAGCCCTTGAATTGTCAGGGACTGCAGTGCCTCCTGATCTCGAGAAACTCTGGAGTGATT TCAAAGATCAACAGAAAGCTGAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGTCTGTGTTTATGGAGGAACAGGAATCAGTGAGCAGATTGCTGAGCTGAAAAGAGGTG CTGAAATTATTGTTTGCACACCTGGTCGAATGATTGACATGTTAGCAGCTAACAGTGGTC GGGTTACAAATCTTCGAAGAGTGACATATGTTGTTTTAGATGAAGCAGACAGAATGTTTG ACATGGGTTTTGAACCACAGGTCATGCGCATTGTGGACAATGTTCGTCCTGATCGACAGA CAGTTATGTTTTCAGCTACTTTCCCCAGAGCTATGGAAGCCTTGGCTCGCAGGATCCTGA GTAAACCCATTGAAGTGCAGGTTGGAGGCAGAAGCGTGGTTTGCTCAGATGTGGAGCAGC AAGTGATTGTGATTGAAGAGGAAAAGAAATTCTTGAAGCTGCTTGAGCTTCTAGGCCATT ATCAAGAATCAGGATCTGTCATCATATTTGTGGATAAGCAGGAACATGCTGATGGTCTTC TGAAAGATTTAATGAGAGCTTCTTACCCTTGCATGTCTCTTCATGGAGGCATTGATCAAT ATGACAGAGATAGCATCATAAATGATTTTAAGAATGGGACCTGCAAACTTCTTGTGGCTA CCTCTGTTGCTGCCCGAGGCCTGGATGTGAAACATCTGATTCTTGTGGTAAATTATAGCT GCCCCAACCATTATGAGGATTATGTGCACAGAGCAGGACGGACTGGAAGAGCAGGCAACA AGGGTTATGCATATACCTTTATCACAGAAGATCAAGCTCGGTATGCCGGTGACATAATTA AAGCCCTTGAATTGTCAGGGACTGCAGTGCCTCCTGATCTCGAGAAACTCTGGAGTGATT TCAAAGATCAACAGAAAGCTGAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 198-365, gnl|bosTau2|chr7 (32333037-32332870) | |
| 198-365, gnl|canFam2|chr11 (25887693-25887891) | |
| 198-365, gnl|danRer3|chr9 (898496-898672) | |
| 198-365, gnl|echTel1|scaffold_251288 (6114-5959) | |
| 198-365, gnl|fr1|chrUn (138830435-138830250) | |
| 198-365, gnl|galGal2|chr13 (14628995-14628793) | |
| 198-365, gnl|hg17|chr5 (134158411-134158614) | |
| 198-365, gnl|Hg17|chr5 (134158436-134158603) | |
| 198-365, gnl|loxAfr1|scaffold_39068 (3373-3570) | |
| 198-365, gnl|mm7|chr13 (54751109-54751305) | |
| 198-365, gnl|Mm7|chr13 (54751127-54751294) | |
| 198-365, gnl|monDom2|scaffold_6 (98519345-98519540) | |
| 198-365, gnl|oryCun1|scaffold_204750 (11516-11712) | |
| 198-365, gnl|panTro1|chr4_random (12954011-12954214) | |
| 198-365, gnl|rheMac2|chr6 (131228374-131228578) | |
| 198-365, gnl|rn3|chr17 (15002467-15002266) | |
| 198-365, gnl|tetNig1|chr7 (7872610-7872435) | |
| 198-365, gnl|xenTro1|scaffold_336 (415433-415229) | |
| 527-721, gnl|bosTau2|chr7 (32324046-32323852) | |
| 527-721, gnl|canFam2|chr11 (25898636-25898847) | |
| 527-721, gnl|danRer3|chr9 (900544-900740) | |
| 527-721, gnl|dasNov1|scaffold_57481 (10773-10560) | |
| 527-721, gnl|echTel1|scaffold_236209 (618-821) | |
| 527-721, gnl|fr1|chrUn (138829894-138829686) | |
| 527-721, gnl|galGal2|chr13 (14627415-14627199) | |
| 527-721, gnl|hg17|chr5 (134171321-134171529) | |
| 527-721, gnl|Hg17|chr5 (134171335-134171529) | |
| 527-721, gnl|loxAfr1|scaffold_18553 (1444-1652) | |
| 527-721, gnl|mm7|chr13 (54754082-54754290) | |
| 527-721, gnl|Mm7|chr13 (54754096-54754290) | |
| 527-721, gnl|monDom2|scaffold_6 (98527671-98527879) | |
| 527-721, gnl|oryCun1|scaffold_204750 (14261-14469) | |
| 527-721, gnl|panTro1|chr4_random (12966929-12967137) | |
| 527-721, gnl|rheMac2|chr6 (131241096-131241304) | |
| 527-721, gnl|rn3|chr17 (15000322-15000114) | |
| 527-721, gnl|tetNig1|chr7 (7872108-7871907) | |
| 527-721, gnl|xenTro1|scaffold_336 (414020-413811) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 198-365, gnl|bosTau2|chr7 (32333037-32332870) | |
| 198-365, gnl|canFam2|chr11 (25887693-25887891) | |
| 198-365, gnl|danRer3|chr9 (898496-898672) | |
| 198-365, gnl|echTel1|scaffold_251288 (6114-5959) | |
| 198-365, gnl|fr1|chrUn (138830435-138830250) | |
| 198-365, gnl|galGal2|chr13 (14628995-14628793) | |
| 198-365, gnl|hg17|chr5 (134158411-134158614) | |
| 198-365, gnl|Hg17|chr5 (134158436-134158603) | |
| 198-365, gnl|loxAfr1|scaffold_39068 (3373-3570) | |
| 198-365, gnl|mm7|chr13 (54751109-54751305) | |
| 198-365, gnl|Mm7|chr13 (54751127-54751294) | |
| 198-365, gnl|monDom2|scaffold_6 (98519345-98519540) | |
| 198-365, gnl|oryCun1|scaffold_204750 (11516-11712) | |
| 198-365, gnl|panTro1|chr4_random (12954011-12954214) | |
| 198-365, gnl|rheMac2|chr6 (131228374-131228578) | |
| 198-365, gnl|rn3|chr17 (15002467-15002266) | |
| 198-365, gnl|tetNig1|chr7 (7872610-7872435) | |
| 198-365, gnl|xenTro1|scaffold_336 (415433-415229) | |
| 527-721, gnl|bosTau2|chr7 (32324046-32323852) | |
| 527-721, gnl|canFam2|chr11 (25898636-25898847) | |
| 527-721, gnl|danRer3|chr9 (900544-900740) | |
| 527-721, gnl|dasNov1|scaffold_57481 (10773-10560) | |
| 527-721, gnl|echTel1|scaffold_236209 (618-821) | |
| 527-721, gnl|fr1|chrUn (138829894-138829686) | |
| 527-721, gnl|galGal2|chr13 (14627415-14627199) | |
| 527-721, gnl|hg17|chr5 (134171321-134171529) | |
| 527-721, gnl|Hg17|chr5 (134171335-134171529) | |
| 527-721, gnl|loxAfr1|scaffold_18553 (1444-1652) | |
| 527-721, gnl|mm7|chr13 (54754082-54754290) | |
| 527-721, gnl|Mm7|chr13 (54754096-54754290) | |
| 527-721, gnl|monDom2|scaffold_6 (98527671-98527879) | |
| 527-721, gnl|oryCun1|scaffold_204750 (14261-14469) | |
| 527-721, gnl|panTro1|chr4_random (12966929-12967137) | |
| 527-721, gnl|rheMac2|chr6 (131241096-131241304) | |
| 527-721, gnl|rn3|chr17 (15000322-15000114) | |
| 527-721, gnl|tetNig1|chr7 (7872108-7871907) | |
| 527-721, gnl|xenTro1|scaffold_336 (414020-413811) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mcp (0.170648) | |
| bla (0.124347) |