Ss1.1-rmcp30c_g16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTTAATTTTCTTGGCCCTCTAGGCTCGAGGCCTCTGTCGCTACCATGCTTCGCCAGATC ATCACGCAGGCCAAGAAGCATCCTAGCTTGATCCCCCTCTTGGTATTTATGGGTGCCGGA GGTACTGGAGCAGCACTGTATGTCACACGCCTGGCATGGTTCAATCCAGATGTCTGTGGG GACAGGAAGAATAACCCAGAACCCTGGAATAAACTGGGTCCCAATGATCAATACAAGTTC TTGGCGGTGAATGTAGATTACAGCAAACTGAAGAAAGAAGGTCCAGACTTCTAAATGAAA TGTTTCACTATAAAGCTGCTTAGAATGAAGGTCTTCCAGAAGCCATCCGCACAATTTTCC ACTTAACCGGGAAATATTTCCCCTCTAAATGCACGAAATCATGTGGTATGGTATGGGGGT TTACACTGATTAATAAATAATCTGAAACTTGAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTTAATTTTCTTGGCCCTCTAGGCTCGAGGCCTCTGTCGCTACCATGCTTCGCCAGATC ATCACGCAGGCCAAGAAGCATCCTAGCTTGATCCCCCTCTTGGTATTTATGGGTGCCGGA GGTACTGGAGCAGCACTGTATGTCACACGCCTGGCATGGTTCAATCCAGATGTCTGTGGG GACAGGAAGAATAACCCAGAACCCTGGAATAAACTGGGTCCCAATGATCAATACAAGTTC TTGGCGGTGAATGTAGATTACAGCAAACTGAAGAAAGAAGGTCCAGACTTCTAAATGAAA TGTTTCACTATAAAGCTGCTTAGAATGAAGGTCTTCCAGAAGCCATCCGCACAATTTTCC ACTTAACCGGGAAATATTTCCCCTCTAAATGCACGAAATCATGTGGTATGGTATGGGGGT TTACACTGATTAATAAATAATCTGAAACTTGAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-467, gnl|bosTau2|chr11 (37612808-37613275) | |
| 1-467, gnl|canFam2|chr21 (21017563-21017950) | |
| 1-467, gnl|canFam2|chr30 (35514111-35514575) | |
| 1-467, gnl|dasNov1|scaffold_113102 (7719-7255) | |
| 1-467, gnl|dasNov1|scaffold_161403 (2952-2568) | |
| 1-467, gnl|echTel1|scaffold_55546 (1974-1510) | |
| 1-467, gnl|echTel1|scaffold_55546 (1569-1954) | |
| 1-467, gnl|Hg17|chr3 (104442477-104442940) | |
| 1-467, gnl|hg17|chr8 (65629171-65629633) | |
| 1-467, gnl|hg17|chrX (70694817-70695206) | |
| 1-467, gnl|loxAfr1|scaffold_85499 (7468-7926) | |
| 1-467, gnl|loxAfr1|scaffold_85499 (7868-7485) | |
| 1-467, gnl|mm7|chrX (4459750-4459300) | |
| 1-467, gnl|mm7|chrX (4459347-4459725) | |
| 1-467, gnl|Mm7|chrX (53112697-53112243) | |
| 1-467, gnl|monDom2|scaffold_16 (34998695-34998260) | |
| 1-467, gnl|monDom2|scaffold_16 (34998300-34998675) | |
| 1-467, gnl|oryCun1|scaffold_98064 (4429-3973) | |
| 1-467, gnl|oryCun1|scaffold_98064 (4025-4409) | |
| 1-467, gnl|panTro1|chr7 (67635277-67635739) | |
| 1-467, gnl|panTro1|chrX (73057087-73056698) | |
| 1-467, gnl|rheMac2|chr8 (67147542-67148008) | |
| 1-467, gnl|rheMac2|chrX (70606913-70607300) | |
| 1-467, gnl|rn3|chr18 (1396351-1396706) | |
| 1-467, gnl|rn3|chr3 (31537797-31538224) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-467, gnl|bosTau2|chr11 (37612808-37613275) | |
| 1-467, gnl|canFam2|chr21 (21017563-21017950) | |
| 1-467, gnl|canFam2|chr30 (35514111-35514575) | |
| 1-467, gnl|dasNov1|scaffold_113102 (7719-7255) | |
| 1-467, gnl|dasNov1|scaffold_161403 (2952-2568) | |
| 1-467, gnl|echTel1|scaffold_55546 (1974-1510) | |
| 1-467, gnl|echTel1|scaffold_55546 (1569-1954) | |
| 1-467, gnl|Hg17|chr3 (104442477-104442940) | |
| 1-467, gnl|hg17|chr8 (65629171-65629633) | |
| 1-467, gnl|hg17|chrX (70694817-70695206) | |
| 1-467, gnl|loxAfr1|scaffold_85499 (7468-7926) | |
| 1-467, gnl|loxAfr1|scaffold_85499 (7868-7485) | |
| 1-467, gnl|mm7|chrX (4459750-4459300) | |
| 1-467, gnl|mm7|chrX (4459347-4459725) | |
| 1-467, gnl|Mm7|chrX (53112697-53112243) | |
| 1-467, gnl|monDom2|scaffold_16 (34998695-34998260) | |
| 1-467, gnl|monDom2|scaffold_16 (34998300-34998675) | |
| 1-467, gnl|oryCun1|scaffold_98064 (4429-3973) | |
| 1-467, gnl|oryCun1|scaffold_98064 (4025-4409) | |
| 1-467, gnl|panTro1|chr7 (67635277-67635739) | |
| 1-467, gnl|panTro1|chrX (73057087-73056698) | |
| 1-467, gnl|rheMac2|chr8 (67147542-67148008) | |
| 1-467, gnl|rheMac2|chrX (70606913-70607300) | |
| 1-467, gnl|rn3|chr18 (1396351-1396706) | |
| 1-467, gnl|rn3|chr3 (31537797-31538224) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| ebs (0.354904) | |
| fce (0.271592) | |
| fcc (0.197785) | |
| mcp (0.170648) | |
| ctl (0.153069) | |
| cov (0.132153) | |
| ese (0.126502) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ebs (0.354904) | |
| fce (0.271592) | |
| fcc (0.197785) | |
| mcp (0.170648) | |
| ctl (0.153069) | |
| cov (0.132153) | |
| ese (0.126502) |