Non-Coding RNA Search

Ss1.1-rmcp33c_n11.5

Sequence:


               
               TGAACGGAGCCACGCACTATGTCTAGAAGACACAAGGATGAGAGAGCCACCTGATCTTGT
CATTTATAAACGTTAAGATTTACTCTGGTGTACTCTTGGTCTGAAAATGGAAGGGCTCAA
ATAATGACATAATTTTTTCAGAGTGAAATTATTCATGGCCATGAAAATATTCCTTTCTAT
TCAGAAGACTGAAATAGGGGAAGCATGAGAGACTCCTTTCTTTAAAAAGCAGCTCTCTGT
TCCACGTAAAAGATTTGTGGGATTGAAAATCACCTGAATGAAGCAGGCAGACTTTTTATT
TTTTAGTAGCCTAGGAGATTCAGAAAACCTAATGAAGCTGTCTTGTGAACTAGTAAATAA
AGGGGGAACTTCTGAATTATTCCCCAGTTAGTCTAAATATTGGGGTGCACTCTTTTGGCT
TATCTTTTTCTAGTCTTGAGCCTTATTCTTATTTGTCAAACCAACGAAGATTCCAGGGTA
GATGTAGAGATGCCTTCTGAGTTCAGTCTTCTAAAGTAGTAAATACCTGTTAAACTTGAA
GTGTTGTTCTGCATTGCAGGCATGCTAAAGTGGAATGATACTGAAACAAAGAGGTATTTT
ATATGTAGGGCAAGGGCAATTAGTAGTATTAGAATAAGCCTCTGGGTATGAGTTAGTGTT
TGCAGGTAGTTATCCAAACTATTGATTAATTGATGAATGTAGTGATCACAGTGTTTTACT
TCTCTCTGGTATCTAAGAACTGGTCAGTCAAAAGCTATTAAAAGAAGGTTTTAAAAGTTA
CCTGATGCTGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAACGGAGCCACGCACTATGTCTAGAAGACACAAGGATGAGAGAGCCACCTGATCTTGT
CATTTATAAACGTTAAGATTTACTCTGGTGTACTCTTGGTCTGAAAATGGAAGGGCTCAA
ATAATGACATAATTTTTTCAGAGTGAAATTATTCATGGCCATGAAAATATTCCTTTCTAT
TCAGAAGACTGAAATAGGGGAAGCATGAGAGACTCCTTTCTTTAAAAAGCAGCTCTCTGT
TCCACGTAAAAGATTTGTGGGATTGAAAATCACCTGAATGAAGCAGGCAGACTTTTTATT
TTTTAGTAGCCTAGGAGATTCAGAAAACCTAATGAAGCTGTCTTGTGAACTAGTAAATAA
AGGGGGAACTTCTGAATTATTCCCCAGTTAGTCTAAATATTGGGGTGCACTCTTTTGGCT
TATCTTTTTCTAGTCTTGAGCCTTATTCTTATTTGTCAAACCAACGAAGATTCCAGGGTA
GATGTAGAGATGCCTTCTGAGTTCAGTCTTCTAAAGTAGTAAATACCTGTTAAACTTGAA
GTGTTGTTCTGCATTGCAGGCATGCTAAAGTGGAATGATACTGAAACAAAGAGGTATTTT
ATATGTAGGGCAAGGGCAATTAGTAGTATTAGAATAAGCCTCTGGGTATGAGTTAGTGTT
TGCAGGTAGTTATCCAAACTATTGATTAATTGATGAATGTAGTGATCACAGTGTTTTACT
TCTCTCTGGTATCTAAGAACTGGTCAGTCAAAAGCTATTAAAAGAAGGTTTTAAAAGTTA
CCTGATGCTGCC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-792, gnl|bosTau2|chr12 (5472850-5473658)
               

               
               1-792, gnl|Hg17|chr13 (44010909-44010078)
               

               
               1-792, gnl|Mm7|chr14 (71120418-71121195)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-792, gnl|bosTau2|chr12 (5472850-5473658)
               

               
               1-792, gnl|Hg17|chr13 (44010909-44010078)
               

               
               1-792, gnl|Mm7|chr14 (71120418-71121195)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               liv (0.292569)
               

               
               mcp (0.170648)
               

               
               pgl (0.118483)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.292569)
               

               
               mcp (0.170648)
               

               
               pgl (0.118483)

	1-792, gnl\|bosTau2\|chr12 (5472850-5473658)
	1-792, gnl\|Hg17\|chr13 (44010909-44010078)
	1-792, gnl\|Mm7\|chr14 (71120418-71121195)