Ss1.1-rmcp34c_d7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAACATTCAAATCGCAAGAATGCTCGAGCTGCCCACCATCTACAGGAAAGTTTATGACC AGCCTTTCCACCACCCAGCCCTGGAGAAAGAAGAGGCCCTGAGCAATCCAGGCGCCTTGG ACCTCAACAGTCTCACATGTCTGCTGAGCGAAAAAGCTAAAGAATTCCTTGTGGAGAACC GAGTGCAAAGCTTTTACCAGCAGGAGTTAGAAACGGTGGAGTCCTTGCTGTCGCTGGCCA AACAGCCCGTGGTTCACAGCACCTGCCCTGGGCAGGTGGATTTTAAAAATGACACCACCT CCAAGGCAATTCATAGTATATTTAAGAATGCTATAAAGCTGCTACAGGAAAAAGGATTCG TTTTCCAGAAAGATCGTGGTTTTGATAACTTATTCTATGTAACTAGAGAAGACAAAGAAT TGCACAGAAAGATCCTGCAGATCATTCAAGAGGACTGCCAGAAACCAAATCACGTGGAGA AGGGCTGCCACTTCCTGCACATCTTGGCCTGTGCTCGCCTGAGCCTCAGCCCAGGCCTGA GCGAACCTGTGCTACGGCACGTGCTGGAGCTCCTGGAGGACCAGAGTGACATTGTCAGCA CCTCAGAGAACTACTACACAACATTCTGAGGAGAGGCCAGCAGGTGGCATGAACCTGGCG GACGAGGAGGAGGACCAGGTGGCTTTCACCCCAGACTCCAGTTTTAACATCATGCCCAGC CTTATAGGTCTGGGGGCAATTATCATAATAAACTATGAAATATGGTAATTTGAGGAATGG AATTTGGCATAAACTCTGGAGGGTGTCTTCAACCTACTATCTCTGGGGATAAAATGACTT GGCCATGATGTACAAGAAAACGTTCCTCATTGGCCTCCTGGCTGGACCAAAGAGCAGCAG AGCAAGAACCAGTGTTGGCAGCTGAACTGATTGGAGGCTCTTTTGTAAAGGGGCATCCGT GGCAAAGGGCCATGTGCTGTGCAAGCTGAAGAGCATGCAGATCAACAGATCGGACCCTTT CTTAAACTTCAGACCATCAGGGACTTTTTCGTGGACTTCTCTTGATGGTTAAGAACCTGG TGTAGGGGAATAATTCTCCCTGGATAAGTGTTGACCTACAGTTTCTGCAAGTCACACACC AGCAATGGGTCCAGAGTCCTGGGTTGAATTCTGTTTACAGACTGACCCATAGATGGGAAT AAACAGGATCCAAGGCAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAACATTCAAATCGCAAGAATGCTCGAGCTGCCCACCATCTACAGGAAAGTTTATGACC AGCCTTTCCACCACCCAGCCCTGGAGAAAGAAGAGGCCCTGAGCAATCCAGGCGCCTTGG ACCTCAACAGTCTCACATGTCTGCTGAGCGAAAAAGCTAAAGAATTCCTTGTGGAGAACC GAGTGCAAAGCTTTTACCAGCAGGAGTTAGAAACGGTGGAGTCCTTGCTGTCGCTGGCCA AACAGCCCGTGGTTCACAGCACCTGCCCTGGGCAGGTGGATTTTAAAAATGACACCACCT CCAAGGCAATTCATAGTATATTTAAGAATGCTATAAAGCTGCTACAGGAAAAAGGATTCG TTTTCCAGAAAGATCGTGGTTTTGATAACTTATTCTATGTAACTAGAGAAGACAAAGAAT TGCACAGAAAGATCCTGCAGATCATTCAAGAGGACTGCCAGAAACCAAATCACGTGGAGA AGGGCTGCCACTTCCTGCACATCTTGGCCTGTGCTCGCCTGAGCCTCAGCCCAGGCCTGA GCGAACCTGTGCTACGGCACGTGCTGGAGCTCCTGGAGGACCAGAGTGACATTGTCAGCA CCTCAGAGAACTACTACACAACATTCTGAGGAGAGGCCAGCAGGTGGCATGAACCTGGCG GACGAGGAGGAGGACCAGGTGGCTTTCACCCCAGACTCCAGTTTTAACATCATGCCCAGC CTTATAGGTCTGGGGGCAATTATCATAATAAACTATGAAATATGGTAATTTGAGGAATGG AATTTGGCATAAACTCTGGAGGGTGTCTTCAACCTACTATCTCTGGGGATAAAATGACTT GGCCATGATGTACAAGAAAACGTTCCTCATTGGCCTCCTGGCTGGACCAAAGAGCAGCAG AGCAAGAACCAGTGTTGGCAGCTGAACTGATTGGAGGCTCTTTTGTAAAGGGGCATCCGT GGCAAAGGGCCATGTGCTGTGCAAGCTGAAGAGCATGCAGATCAACAGATCGGACCCTTT CTTAAACTTCAGACCATCAGGGACTTTTTCGTGGACTTCTCTTGATGGTTAAGAACCTGG TGTAGGGGAATAATTCTCCCTGGATAAGTGTTGACCTACAGTTTCTGCAAGTCACACACC AGCAATGGGTCCAGAGTCCTGGGTTGAATTCTGTTTACAGACTGACCCATAGATGGGAAT AAACAGGATCCAAGGCAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 102-277, gnl|bosTau2|chr26 (16464339-16464514) | |
| 102-277, gnl|canFam2|chr28 (19221854-19222185) | |
| 102-277, gnl|canFam2|chr28 (19222112-19221936) | |
| 102-277, gnl|dasNov1|scaffold_7578 (38889-38564) | |
| 102-277, gnl|dasNov1|scaffold_7578 (38635-38814) | |
| 102-277, gnl|echTel1|scaffold_243121 (6476-6174) | |
| 102-277, gnl|echTel1|scaffold_243121 (6232-6401) | |
| 102-277, gnl|hg17|chr10 (105647217-105647543) | |
| 102-277, gnl|Hg17|chr10 (105647469-105647294) | |
| 102-277, gnl|hg17|chr5 (154758040-154758219) | |
| 102-277, gnl|loxAfr1|scaffold_10895 (25617-25304) | |
| 102-277, gnl|loxAfr1|scaffold_10895 (25363-25542) | |
| 102-277, gnl|mm7|chr19 (47414233-47414557) | |
| 102-277, gnl|mm7|chr19 (47414480-47414303) | |
| 102-277, gnl|Mm7|chr19 (47414481-47414306) | |
| 102-277, gnl|monDom2|scaffold_14 (59315269-59314945) | |
| 102-277, gnl|monDom2|scaffold_14 (59315028-59315206) | |
| 102-277, gnl|oryCun1|scaffold_185972 (68475-68807) | |
| 102-277, gnl|oryCun1|scaffold_185972 (68728-68549) | |
| 102-277, gnl|panTro1|chr4_random (16407568-16407747) | |
| 102-277, gnl|panTro1|chr8 (107429311-107429637) | |
| 102-277, gnl|rheMac2|chr6 (151756023-151756202) | |
| 102-277, gnl|rheMac2|chr9 (103597972-103598299) | |
| 102-277, gnl|rn3|chr1 (253151391-253151690) | |
| 102-277, gnl|rn3|chr1 (253151614-253151437) | |
| 472-815, gnl|bosTau2|chr26 (16481104-16481447) | |
| 472-815, gnl|Hg17|chr10 (105632589-105632252) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 102-277, gnl|bosTau2|chr26 (16464339-16464514) | |
| 102-277, gnl|canFam2|chr28 (19221854-19222185) | |
| 102-277, gnl|canFam2|chr28 (19222112-19221936) | |
| 102-277, gnl|dasNov1|scaffold_7578 (38889-38564) | |
| 102-277, gnl|dasNov1|scaffold_7578 (38635-38814) | |
| 102-277, gnl|echTel1|scaffold_243121 (6476-6174) | |
| 102-277, gnl|echTel1|scaffold_243121 (6232-6401) | |
| 102-277, gnl|hg17|chr10 (105647217-105647543) | |
| 102-277, gnl|Hg17|chr10 (105647469-105647294) | |
| 102-277, gnl|hg17|chr5 (154758040-154758219) | |
| 102-277, gnl|loxAfr1|scaffold_10895 (25617-25304) | |
| 102-277, gnl|loxAfr1|scaffold_10895 (25363-25542) | |
| 102-277, gnl|mm7|chr19 (47414233-47414557) | |
| 102-277, gnl|mm7|chr19 (47414480-47414303) | |
| 102-277, gnl|Mm7|chr19 (47414481-47414306) | |
| 102-277, gnl|monDom2|scaffold_14 (59315269-59314945) | |
| 102-277, gnl|monDom2|scaffold_14 (59315028-59315206) | |
| 102-277, gnl|oryCun1|scaffold_185972 (68475-68807) | |
| 102-277, gnl|oryCun1|scaffold_185972 (68728-68549) | |
| 102-277, gnl|panTro1|chr4_random (16407568-16407747) | |
| 102-277, gnl|panTro1|chr8 (107429311-107429637) | |
| 102-277, gnl|rheMac2|chr6 (151756023-151756202) | |
| 102-277, gnl|rheMac2|chr9 (103597972-103598299) | |
| 102-277, gnl|rn3|chr1 (253151391-253151690) | |
| 102-277, gnl|rn3|chr1 (253151614-253151437) | |
| 472-815, gnl|bosTau2|chr26 (16481104-16481447) | |
| 472-815, gnl|Hg17|chr10 (105632589-105632252) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mcp (0.170648) |