Ss1.1-rmed06c_o14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCTGCTCATTTGGTTCAAGAGGGAGTTCCCCTTCCCGGACGTCCTGAGGCTGTGGGAGG TGCTGTGGACAGGGCTCCCGGGCCCCAATCTGCACCTGCTGGTGGCCTGTGCCATCTTGG ACATGGAGCGGGACACCCTCATGCTTTCGGGCTTCGGCTCCAATGAGATCCTCAAGCACA TCAACGAGCTGACCATGAAGCTAAGTGTGGAGGACGTGCTGACGCGGGCCGAGGCCCTTT ACCGGCAGCTGACTGCCTGCCGGGAGCTGCCCCACAACGTGCAGGAGGTCCTGGGTCTGG CGCCACCCGCAGAGCCCCAGAGCCCGTCGCCCCCTGCCTCCCCACTGCCGCTGTCGCCCG CCCGGGCCCCGCCGGCTCCGCCGCCCCCTGCGGACACAGTCCAGCAGCCGGACAGCAGCT TGGAGATCCTGCCAGAAGAGGAGGAGGAGGAGAGCGCGGACTCCTAACCCAGCCGCGCGA CAGCCGCCAGCTCAGTGGCAGACACTCTTCAGCTCTCACCCCACGACCCAGTCCCTCCTG GAGGCCGGGGAGGGGAGGGGAGGGGACTGGGTTCTTGAAACTGACACTTTTCCTGTCCAG TCGGCCTCGAGTAGGTGGAGGAAGGCAGCCACCACGTTAGCTTGGCCCTGGATGGGGAGG GGGTGGCTCGGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCTGCTCATTTGGTTCAAGAGGGAGTTCCCCTTCCCGGACGTCCTGAGGCTGTGGGAGG TGCTGTGGACAGGGCTCCCGGGCCCCAATCTGCACCTGCTGGTGGCCTGTGCCATCTTGG ACATGGAGCGGGACACCCTCATGCTTTCGGGCTTCGGCTCCAATGAGATCCTCAAGCACA TCAACGAGCTGACCATGAAGCTAAGTGTGGAGGACGTGCTGACGCGGGCCGAGGCCCTTT ACCGGCAGCTGACTGCCTGCCGGGAGCTGCCCCACAACGTGCAGGAGGTCCTGGGTCTGG CGCCACCCGCAGAGCCCCAGAGCCCGTCGCCCCCTGCCTCCCCACTGCCGCTGTCGCCCG CCCGGGCCCCGCCGGCTCCGCCGCCCCCTGCGGACACAGTCCAGCAGCCGGACAGCAGCT TGGAGATCCTGCCAGAAGAGGAGGAGGAGGAGAGCGCGGACTCCTAACCCAGCCGCGCGA CAGCCGCCAGCTCAGTGGCAGACACTCTTCAGCTCTCACCCCACGACCCAGTCCCTCCTG GAGGCCGGGGAGGGGAGGGGAGGGGACTGGGTTCTTGAAACTGACACTTTTCCTGTCCAG TCGGCCTCGAGTAGGTGGAGGAAGGCAGCCACCACGTTAGCTTGGCCCTGGATGGGGAGG GGGTGGCTCGGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 58-176, gnl|bosTau2|chr18 (48918224-48918342) | |
| 58-176, gnl|canFam2|chr1 (109563482-109563390) | |
| 58-176, gnl|danRer3|chr3 (24350076-24349995) | |
| 58-176, gnl|echTel1|scaffold_157523 (4278-4363) | |
| 58-176, gnl|fr1|chrUn (267978976-267979065) | |
| 58-176, gnl|hg17|chr19 (55082762-55082862) | |
| 58-176, gnl|Hg17|chr19 (55082785-55082903) | |
| 58-176, gnl|mm7|chr7 (41016636-41016548) | |
| 58-176, gnl|Mm7|chr7 (41016623-41016505) | |
| 58-176, gnl|monDom2|scaffold_105 (3948208-3948121) | |
| 58-176, gnl|panTro1|chr20 (52446354-52446454) | |
| 58-176, gnl|rheMac2|chr19 (56166210-56166306) | |
| 58-176, gnl|rn3|chr1 (95392612-95392524) | |
| 58-176, gnl|xenTro1|scaffold_1147 (144401-144300) | |
| 256-565, gnl|bosTau2|chr18 (48919265-48919589) | |
| 256-565, gnl|Hg17|chr19 (55083486-55083765) | |
| 567-666, gnl|bosTau2|chr18 (48919623-48919722) | |
| 567-666, gnl|canFam2|chr1 (109562170-109562045) | |
| 567-666, gnl|echTel1|scaffold_156766 (3490-3366) | |
| 567-666, gnl|hg17|chr19 (55083766-55083889) | |
| 567-666, gnl|Hg17|chr19 (55083787-55083884) | |
| 567-666, gnl|loxAfr1|scaffold_188738 (1532-1411) | |
| 567-666, gnl|monDom2|scaffold_105 (3947505-3947422) | |
| 567-666, gnl|panTro1|chr20 (52447358-52447481) | |
| 567-666, gnl|rheMac2|chr19 (56167210-56167333) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 58-176, gnl|bosTau2|chr18 (48918224-48918342) | |
| 58-176, gnl|canFam2|chr1 (109563482-109563390) | |
| 58-176, gnl|danRer3|chr3 (24350076-24349995) | |
| 58-176, gnl|echTel1|scaffold_157523 (4278-4363) | |
| 58-176, gnl|fr1|chrUn (267978976-267979065) | |
| 58-176, gnl|hg17|chr19 (55082762-55082862) | |
| 58-176, gnl|Hg17|chr19 (55082785-55082903) | |
| 58-176, gnl|mm7|chr7 (41016636-41016548) | |
| 58-176, gnl|Mm7|chr7 (41016623-41016505) | |
| 58-176, gnl|monDom2|scaffold_105 (3948208-3948121) | |
| 58-176, gnl|panTro1|chr20 (52446354-52446454) | |
| 58-176, gnl|rheMac2|chr19 (56166210-56166306) | |
| 58-176, gnl|rn3|chr1 (95392612-95392524) | |
| 58-176, gnl|xenTro1|scaffold_1147 (144401-144300) | |
| 256-565, gnl|bosTau2|chr18 (48919265-48919589) | |
| 256-565, gnl|Hg17|chr19 (55083486-55083765) | |
| 567-666, gnl|bosTau2|chr18 (48919623-48919722) | |
| 567-666, gnl|canFam2|chr1 (109562170-109562045) | |
| 567-666, gnl|echTel1|scaffold_156766 (3490-3366) | |
| 567-666, gnl|hg17|chr19 (55083766-55083889) | |
| 567-666, gnl|Hg17|chr19 (55083787-55083884) | |
| 567-666, gnl|loxAfr1|scaffold_188738 (1532-1411) | |
| 567-666, gnl|monDom2|scaffold_105 (3947505-3947422) | |
| 567-666, gnl|panTro1|chr20 (52447358-52447481) | |
| 567-666, gnl|rheMac2|chr19 (56167210-56167333) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.285673) | |
| ctl (0.153069) | |
| med (0.116252) |