Non-Coding RNA Search

Ss1.1-rmed07c_a24.5

Sequence:


               
               GCTGCCGCGCTTCGCCCGCTCCCTGTAGGAAACCCGGGAGGGCACGTGGAGACGGAACCG
CAGCCTTAGATCGGCAGGCAAACCAGACTTCCCACAGACCGGTCGTGCCGGCTTCCACGT
CTCCCGCCAGCATCTCTGGGAGTCGACGGGGGGTGGTGTGTGGTGGCACCGCGGTCGCCT
AGAGCGTGATGACCGTTTATCCAAGAGTGGCAGTTTGGTCACACTGCTCTTGATGAAAGA
TGCTCAGACGCCCTAAGAGGCGGCACTGGGGTGTCGCGGGGAGGGGCCGGCGGCTGTGCG
GGGTTGTGTTGGCTGCTCTGTGTCGGGGCCGCACGGGGTCTGCTTATACACGTTGGAGGG
AAAGCGGGTCAGTACCAAACAGCAACCTGTCTGCGACAACATCCTTCGCGGGTGCAGGGC
TCTGCTATCTACAGGTGGTGATTGGTCCAACTTTTCGTAGAACAATTCTGTTTTTACTCA
CTTTCTGGTAACTTCTGTAGGCCCCGATTCAAGGACTTCACTGTGCGTCTCATGTACATC
TCTCTCTCAAATGTCTGCCGTTTCTGGAACTGTCCTTGGTTTTCCCTTAGCTCATAGGTC
ATAGATGCAGAAATATTAGAGTATTTAAGGCATCCGCATCCAGCATCAGATGGCTTTGCA
TCCAGAAAAAAACATTTAACGATAATTCAGTTTGAAGCACCAAGCATGTGTAACATGGCT
CTATAAAATATAATAAACGCATAATGTTGTTAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGCCGCGCTTCGCCCGCTCCCTGTAGGAAACCCGGGAGGGCACGTGGAGACGGAACCG
CAGCCTTAGATCGGCAGGCAAACCAGACTTCCCACAGACCGGTCGTGCCGGCTTCCACGT
CTCCCGCCAGCATCTCTGGGAGTCGACGGGGGGTGGTGTGTGGTGGCACCGCGGTCGCCT
AGAGCGTGATGACCGTTTATCCAAGAGTGGCAGTTTGGTCACACTGCTCTTGATGAAAGA
TGCTCAGACGCCCTAAGAGGCGGCACTGGGGTGTCGCGGGGAGGGGCCGGCGGCTGTGCG
GGGTTGTGTTGGCTGCTCTGTGTCGGGGCCGCACGGGGTCTGCTTATACACGTTGGAGGG
AAAGCGGGTCAGTACCAAACAGCAACCTGTCTGCGACAACATCCTTCGCGGGTGCAGGGC
TCTGCTATCTACAGGTGGTGATTGGTCCAACTTTTCGTAGAACAATTCTGTTTTTACTCA
CTTTCTGGTAACTTCTGTAGGCCCCGATTCAAGGACTTCACTGTGCGTCTCATGTACATC
TCTCTCTCAAATGTCTGCCGTTTCTGGAACTGTCCTTGGTTTTCCCTTAGCTCATAGGTC
ATAGATGCAGAAATATTAGAGTATTTAAGGCATCCGCATCCAGCATCAGATGGCTTTGCA
TCCAGAAAAAAACATTTAACGATAATTCAGTTTGAAGCACCAAGCATGTGTAACATGGCT
CTATAAAATATAATAAACGCATAATGTTGTTAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               13-748, gnl|bosTau2|chr21 (44948431-44949174)
               

               
               13-748, gnl|Hg17|chr14 (99818096-99818871)
               

               
               13-748, gnl|Mm7|chr12 (106340707-106341316)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-748, gnl|bosTau2|chr21 (44948431-44949174)
               

               
               13-748, gnl|Hg17|chr14 (99818096-99818871)
               

               
               13-748, gnl|Mm7|chr12 (106340707-106341316)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               sme (0.305437)
               

               
               fce (0.271592)
               

               
               fcc (0.197785)
               

               
               fhi (0.169578)
               

               
               che (0.136314)
               

               
               eru (0.120048)
               

               
               med (0.116252)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sme (0.305437)
               

               
               fce (0.271592)
               

               
               fcc (0.197785)
               

               
               fhi (0.169578)
               

               
               che (0.136314)
               

               
               eru (0.120048)
               

               
               med (0.116252)

	13-748, gnl\|bosTau2\|chr21 (44948431-44949174)
	13-748, gnl\|Hg17\|chr14 (99818096-99818871)
	13-748, gnl\|Mm7\|chr12 (106340707-106341316)

	sme (0.305437)
	fce (0.271592)
	fcc (0.197785)
	fhi (0.169578)
	che (0.136314)
	eru (0.120048)
	med (0.116252)