Non-Coding RNA Search

Ss1.1-rmed09c_f8.5

Sequence:


               
               CATGATGGTCACTGACAGCAATGGTGCCGTCAAGCTTCCACAACTGTGTAAATTCTGTGA
TGTGCGATCATCCACCTGTGACAACCAGAAGTCCTGCCTGAGCAACTGCAGCATCACAGC
CATCTGTGAGAAGCCACAGGAGGTCTGCGTGGCTGTCTGGAGGAAGAATGACGAGAACAT
CACGATTGAGACAGTTTGTCACGACCCCAAGATCGCCTACCACGGATTTGTTCTCGATGA
CGCCGCTTCTTCAAAATGTATTATGAAGGAGAGAAAAGGGTCTGGAGAGACGTTCTTCAT
GTGCTCCTGCAGCTCAGACGAGTGCAACGACCACATCATCTTCTCAGAAGAGTATGCCAC
CAACAACCCCGACTTGCTGTTAGTCATCTTCCAAGTGACAGGTGTCAGCCTCCTGCCACC
ACTAGGCATCGCCATCGCCGTCATCATCACCTTCTACTGCTACCGTGTCCACCGGCAGCA
GAAGCTGAGCCCATCCTGGGACTCAGGGAAGCCGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATGATGGTCACTGACAGCAATGGTGCCGTCAAGCTTCCACAACTGTGTAAATTCTGTGA
TGTGCGATCATCCACCTGTGACAACCAGAAGTCCTGCCTGAGCAACTGCAGCATCACAGC
CATCTGTGAGAAGCCACAGGAGGTCTGCGTGGCTGTCTGGAGGAAGAATGACGAGAACAT
CACGATTGAGACAGTTTGTCACGACCCCAAGATCGCCTACCACGGATTTGTTCTCGATGA
CGCCGCTTCTTCAAAATGTATTATGAAGGAGAGAAAAGGGTCTGGAGAGACGTTCTTCAT
GTGCTCCTGCAGCTCAGACGAGTGCAACGACCACATCATCTTCTCAGAAGAGTATGCCAC
CAACAACCCCGACTTGCTGTTAGTCATCTTCCAAGTGACAGGTGTCAGCCTCCTGCCACC
ACTAGGCATCGCCATCGCCGTCATCATCACCTTCTACTGCTACCGTGTCCACCGGCAGCA
GAAGCTGAGCCCATCCTGGGACTCAGGGAAGCCGCG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|20151053|pdb|1KTZ|B

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|20151053|pdb|1KTZ|B

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               159-350, gnl|bosTau2|chr22 (3339182-3338991)
               

               
               159-350, gnl|Hg17|chr3 (30666765-30666956)
               

               
               159-350, gnl|Mm7|chr9 (115802334-115802143)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               159-350, gnl|bosTau2|chr22 (3339182-3338991)
               

               
               159-350, gnl|Hg17|chr3 (30666765-30666956)
               

               
               159-350, gnl|Mm7|chr9 (115802334-115802143)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	159-350, gnl\|bosTau2\|chr22 (3339182-3338991)
	159-350, gnl\|Hg17\|chr3 (30666765-30666956)
	159-350, gnl\|Mm7\|chr9 (115802334-115802143)