Ss1.1-rmed10c_o7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCCGCGCTCCCGGCCCCACCATGGGCAACAGCGCGGGCCGCAGCGACTTCGAGTGGGTC TACACGGACCAGCCGCACACGCAGCGGCGCAAGGAGATGCTTGCCAAGTACCCGGCCATC AAGGCCCTGATGCGGCCGGACCCCCGTCTCAAGTGGGCGGTGACGGGGCTGGTGCTGGCG CAGCTGCTGGCCTGCTGGCTGGTGCGGGGCCTGGCGTGGCGCTGGCTGCTCTTCTGGGCC TACGCCTTCGGGGGCTGCGTGAACCACTCGCTGACGCTGGCCATCCACGACATCTCGCAC AACGCCGCCTTCGGCACCGGCCGCGCCGCCCACAACCGCTGGTTCGCCGTCTTCGCCAAC CTGCCCATGGGCGTGCCCTACGCCGCCTCCTTCAAGAAGTACCACGTGGACCACCACCGC TACCTGGGCGGCGACGGGCTGGACGTGGACGTGCCCACGCGCCTCGAGGGCTGGCTCTTC TGCACGCCGGCCCGCAAGCTGCTCTGGCTGGCGCTGCAGCCTTTCTTCTACTCGCTGCGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCCGCGCTCCCGGCCCCACCATGGGCAACAGCGCGGGCCGCAGCGACTTCGAGTGGGTC TACACGGACCAGCCGCACACGCAGCGGCGCAAGGAGATGCTTGCCAAGTACCCGGCCATC AAGGCCCTGATGCGGCCGGACCCCCGTCTCAAGTGGGCGGTGACGGGGCTGGTGCTGGCG CAGCTGCTGGCCTGCTGGCTGGTGCGGGGCCTGGCGTGGCGCTGGCTGCTCTTCTGGGCC TACGCCTTCGGGGGCTGCGTGAACCACTCGCTGACGCTGGCCATCCACGACATCTCGCAC AACGCCGCCTTCGGCACCGGCCGCGCCGCCCACAACCGCTGGTTCGCCGTCTTCGCCAAC CTGCCCATGGGCGTGCCCTACGCCGCCTCCTTCAAGAAGTACCACGTGGACCACCACCGC TACCTGGGCGGCGACGGGCTGGACGTGGACGTGCCCACGCGCCTCGAGGGCTGGCTCTTC TGCACGCCGGCCCGCAAGCTGCTCTGGCTGGCGCTGCAGCCTTTCTTCTACTCGCTGCGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 1-101, gnl|bosTau2|chr21 (44580239-44580339) | |
| 1-101, gnl|canFam2|chr8 (71521754-71521851) | |
| 1-101, gnl|danRer3|chr17 (38717144-38717045) | |
| 1-101, gnl|dasNov1|scaffold_88372 (3353-3268) | |
| 1-101, gnl|echTel1|scaffold_144054 (732-826) | |
| 1-101, gnl|fr1|chrUn (119581007-119580918) | |
| 1-101, gnl|galGal2|chr5 (45299253-45299338) | |
| 1-101, gnl|hg17|chr14 (99695592-99695689) | |
| 1-101, gnl|Hg17|chr14 (99695698-99695598) | |
| 1-101, gnl|loxAfr1|scaffold_19438 (12468-12372) | |
| 1-101, gnl|mm7|chr12 (106223056-106223152) | |
| 1-101, gnl|Mm7|chr12 (106223162-106223062) | |
| 1-101, gnl|monDom2|scaffold_13 (31384740-31384643) | |
| 1-101, gnl|oryCun1|scaffold_166593 (3991-4089) | |
| 1-101, gnl|panTro1|chr15 (100199290-100199387) | |
| 1-101, gnl|rheMac2|chr7 (163427199-163427296) | |
| 1-101, gnl|rn3|chr6 (133043668-133043764) | |
| 1-101, gnl|tetNig1|chr10 (5699829-5699766) | |
| 1-101, gnl|xenTro1|scaffold_341 (588878-588784) | |
| 103-540, gnl|bosTau2|chr21 (44595967-44596404) | |
| 103-540, gnl|canFam2|chr8 (71503748-71504329) | |
| 103-540, gnl|danRer3|chr17 (38720424-38719845) | |
| 103-540, gnl|dasNov1|scaffold_4259 (48565-47981) | |
| 103-540, gnl|echTel1|scaffold_283756 (921-339) | |
| 103-540, gnl|fr1|chrUn (119583686-119583106) | |
| 103-540, gnl|galGal2|chr5 (45290708-45291294) | |
| 103-540, gnl|hg17|chr14 (99685231-99685824) | |
| 103-540, gnl|Hg17|chr14 (99685801-99685364) | |
| 103-540, gnl|loxAfr1|scaffold_16495 (634-1216) | |
| 103-540, gnl|mm7|chr12 (106212966-106213553) | |
| 103-540, gnl|Mm7|chr12 (106213536-106213099) | |
| 103-540, gnl|monDom2|scaffold_6 (81634797-81635391) | |
| 103-540, gnl|oryCun1|scaffold_59950 (1519-933) | |
| 103-540, gnl|panTro1|chr15 (100188722-100189315) | |
| 103-540, gnl|rheMac2|chr7 (163417302-163417857) | |
| 103-540, gnl|rn3|chr6 (133030995-133031587) | |
| 103-540, gnl|tetNig1|chr10 (5702456-5701875) | |
| 103-540, gnl|xenTro1|scaffold_341 (591017-590428) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-101, gnl|bosTau2|chr21 (44580239-44580339) | |
| 1-101, gnl|canFam2|chr8 (71521754-71521851) | |
| 1-101, gnl|danRer3|chr17 (38717144-38717045) | |
| 1-101, gnl|dasNov1|scaffold_88372 (3353-3268) | |
| 1-101, gnl|echTel1|scaffold_144054 (732-826) | |
| 1-101, gnl|fr1|chrUn (119581007-119580918) | |
| 1-101, gnl|galGal2|chr5 (45299253-45299338) | |
| 1-101, gnl|hg17|chr14 (99695592-99695689) | |
| 1-101, gnl|Hg17|chr14 (99695698-99695598) | |
| 1-101, gnl|loxAfr1|scaffold_19438 (12468-12372) | |
| 1-101, gnl|mm7|chr12 (106223056-106223152) | |
| 1-101, gnl|Mm7|chr12 (106223162-106223062) | |
| 1-101, gnl|monDom2|scaffold_13 (31384740-31384643) | |
| 1-101, gnl|oryCun1|scaffold_166593 (3991-4089) | |
| 1-101, gnl|panTro1|chr15 (100199290-100199387) | |
| 1-101, gnl|rheMac2|chr7 (163427199-163427296) | |
| 1-101, gnl|rn3|chr6 (133043668-133043764) | |
| 1-101, gnl|tetNig1|chr10 (5699829-5699766) | |
| 1-101, gnl|xenTro1|scaffold_341 (588878-588784) | |
| 103-540, gnl|bosTau2|chr21 (44595967-44596404) | |
| 103-540, gnl|canFam2|chr8 (71503748-71504329) | |
| 103-540, gnl|danRer3|chr17 (38720424-38719845) | |
| 103-540, gnl|dasNov1|scaffold_4259 (48565-47981) | |
| 103-540, gnl|echTel1|scaffold_283756 (921-339) | |
| 103-540, gnl|fr1|chrUn (119583686-119583106) | |
| 103-540, gnl|galGal2|chr5 (45290708-45291294) | |
| 103-540, gnl|hg17|chr14 (99685231-99685824) | |
| 103-540, gnl|Hg17|chr14 (99685801-99685364) | |
| 103-540, gnl|loxAfr1|scaffold_16495 (634-1216) | |
| 103-540, gnl|mm7|chr12 (106212966-106213553) | |
| 103-540, gnl|Mm7|chr12 (106213536-106213099) | |
| 103-540, gnl|monDom2|scaffold_6 (81634797-81635391) | |
| 103-540, gnl|oryCun1|scaffold_59950 (1519-933) | |
| 103-540, gnl|panTro1|chr15 (100188722-100189315) | |
| 103-540, gnl|rheMac2|chr7 (163417302-163417857) | |
| 103-540, gnl|rn3|chr6 (133030995-133031587) | |
| 103-540, gnl|tetNig1|chr10 (5702456-5701875) | |
| 103-540, gnl|xenTro1|scaffold_341 (591017-590428) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.534688) | |
| med (0.116252) |