Non-Coding RNA Search

Ss1.1-rmed11c_d19.5

Sequence:


               
               GGAGGCCAGGAGGAGAACCCTGTATATGCCAGTTTCCTGTGATCCCCGCTCCTCATTCCT
CATGGCGGTAATACGTAATTCTGGCTGCACAGGACAATTTCCCAGATCCTTTAAATGGGT
GATAAGACCTTTCCTGATCTGATTTCTTTGGACTGAGGAATAGCTCGGTTTTCAATGTTT
TTTGAAAAACCTCTTTCAGGTAGTTCTAATGAACAATTGAAGTTAAGAACTGTAGGCCCA
GAGGAAAAATACCAAATGACTTTAGCTGAATACCTAAGGCTGTCATAATTTTCCCATTAT
TTATTAAGTATTTTGAAGTGGGAAAATATAAATTACAGAAGTCAATTAAGATGACTTTTT
ATCCTCAAAAGCAGAGCATTATGTTTGGGCGATAATGCATTCTGACAAGACGGTTTTATA
AGTAATGTCAGCACCCAAATGTTTGATGAAAATACCTGACTGTACATGTCTTGTTATGCT
TTCAGAGGATATTTCTCAAAGCAGAAAGTGAAGAAGAAATTTTTGCACACCTGGGATTGG
ATTACCTCGAGCCGTGGGAAAGAAATGCCTAGAGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGGCCAGGAGGAGAACCCTGTATATGCCAGTTTCCTGTGATCCCCGCTCCTCATTCCT
CATGGCGGTAATACGTAATTCTGGCTGCACAGGACAATTTCCCAGATCCTTTAAATGGGT
GATAAGACCTTTCCTGATCTGATTTCTTTGGACTGAGGAATAGCTCGGTTTTCAATGTTT
TTTGAAAAACCTCTTTCAGGTAGTTCTAATGAACAATTGAAGTTAAGAACTGTAGGCCCA
GAGGAAAAATACCAAATGACTTTAGCTGAATACCTAAGGCTGTCATAATTTTCCCATTAT
TTATTAAGTATTTTGAAGTGGGAAAATATAAATTACAGAAGTCAATTAAGATGACTTTTT
ATCCTCAAAAGCAGAGCATTATGTTTGGGCGATAATGCATTCTGACAAGACGGTTTTATA
AGTAATGTCAGCACCCAAATGTTTGATGAAAATACCTGACTGTACATGTCTTGTTATGCT
TTCAGAGGATATTTCTCAAAGCAGAAAGTGAAGAAGAAATTTTTGCACACCTGGGATTGG
ATTACCTCGAGCCGTGGGAAAGAAATGCCTAGAGAC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|560593|gb|AAB30970.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|560593|gb|AAB30970.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               268-572, gnl|bosTau2|chr26 (7726899-7727218)
               

               
               268-572, gnl|Hg17|chr10 (98087669-98087971)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               268-572, gnl|bosTau2|chr26 (7726899-7727218)
               

               
               268-572, gnl|Hg17|chr10 (98087669-98087971)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               spl (0.143184)
               

               
               thg (0.126791)
               

               
               med (0.116252)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               thg (0.126791)
               

               
               med (0.116252)

	268-572, gnl\|bosTau2\|chr26 (7726899-7727218)
	268-572, gnl\|Hg17\|chr10 (98087669-98087971)