Ss1.1-rmed12c_a7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATCCTTTCGAGCTGGCTTTCTCCCTAGACCAGGCCCACCACGGGGAGACGGACTTGAGC CTGGAGTGCCCAGCCCGCCCTGATATGCCCTCGAGCCAGCCCATCGACATCCCTGATGCC AAGAAGAGGGGCAAGAAGAAGAAGAGGTGCCGAGCCACTGACAGTTTTTCTGGCAGGTTT GAAGATGTCTACCAGCTGCAGGAGGACGTTCTTGGGGAGGGTGCCCACGCCCGCGTGCAG ACCTGTGTCAACCTCATCACCAATCAGGAGTATGCCGTCAAGATCATTGAGAAGCAGCCG GGCCACATTCGGAGTAGGGTTTTCCGGGAGGTGGAGATGTTGTATCAGTGCCAGGGACAC AGGAACGTTCTGGAGCTGATTGAGTTCTTTGAGGAGGAGGACCGCTTCTACCTGGTGTTT GAGAAGATGCGGGGCGGCTCCATCCTGAGCCACATCCACAAGCGGCGGCACTTCAATGAG CTGGAAGCCAGTGTGGTGGTGCAGGATGTGGCCAGCGCCCTGGACTTTCTACACAACAAA GGGATCGCCCACAGGGATCTAAAGCCGGAAAACATCCTCTGTGAGCACCCCAACCAGGTC TCCCCTGTGAAGATCTGCGACTTTGACCTGGGCAGTGGCATCAAACTCAACGGGGACTGC TCCCCCATTTCCACCCCGGAGCTGCTCACACCGTGCGGTTCCGCTGAGTACATGGCCCCG GAGGTGGTGGAGGCCTTCAGCGAGGAAGCCAGCATCTACGACAAGCGCTGCGACCTCTGG AGCCTGGGCGTCATCCTCTACATACTGCTTAGCGGCTACCCGCCCTTCGTGGGCCACTGC GGCAGCGACTGCGGCTGGGACCGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATCCTTTCGAGCTGGCTTTCTCCCTAGACCAGGCCCACCACGGGGAGACGGACTTGAGC CTGGAGTGCCCAGCCCGCCCTGATATGCCCTCGAGCCAGCCCATCGACATCCCTGATGCC AAGAAGAGGGGCAAGAAGAAGAAGAGGTGCCGAGCCACTGACAGTTTTTCTGGCAGGTTT GAAGATGTCTACCAGCTGCAGGAGGACGTTCTTGGGGAGGGTGCCCACGCCCGCGTGCAG ACCTGTGTCAACCTCATCACCAATCAGGAGTATGCCGTCAAGATCATTGAGAAGCAGCCG GGCCACATTCGGAGTAGGGTTTTCCGGGAGGTGGAGATGTTGTATCAGTGCCAGGGACAC AGGAACGTTCTGGAGCTGATTGAGTTCTTTGAGGAGGAGGACCGCTTCTACCTGGTGTTT GAGAAGATGCGGGGCGGCTCCATCCTGAGCCACATCCACAAGCGGCGGCACTTCAATGAG CTGGAAGCCAGTGTGGTGGTGCAGGATGTGGCCAGCGCCCTGGACTTTCTACACAACAAA GGGATCGCCCACAGGGATCTAAAGCCGGAAAACATCCTCTGTGAGCACCCCAACCAGGTC TCCCCTGTGAAGATCTGCGACTTTGACCTGGGCAGTGGCATCAAACTCAACGGGGACTGC TCCCCCATTTCCACCCCGGAGCTGCTCACACCGTGCGGTTCCGCTGAGTACATGGCCCCG GAGGTGGTGGAGGCCTTCAGCGAGGAAGCCAGCATCTACGACAAGCGCTGCGACCTCTGG AGCCTGGGCGTCATCCTCTACATACTGCTTAGCGGCTACCCGCCCTTCGTGGGCCACTGC GGCAGCGACTGCGGCTGGGACCGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
| 176-282, gnl|bosTau2|chr7 (18273073-18273179) | |
| 176-282, gnl|canFam2|chr20 (60110717-60110604) | |
| 176-282, gnl|danRer3|chr8 (11862880-11862983) | |
| 176-282, gnl|dasNov1|scaffold_301865 (678-790) | |
| 176-282, gnl|echTel1|scaffold_310246 (37461-37565) | |
| 176-282, gnl|fr1|chrUn (126802016-126801903) | |
| 176-282, gnl|hg17|chr19 (1997181-1997294) | |
| 176-282, gnl|Hg17|chr19 (1997287-1997185) | |
| 176-282, gnl|loxAfr1|scaffold_4751 (26139-26225) | |
| 176-282, gnl|mm7|chr10 (80461263-80461376) | |
| 176-282, gnl|Mm7|chr10 (80461372-80461267) | |
| 176-282, gnl|monDom2|scaffold_75 (3673199-3673312) | |
| 176-282, gnl|oryCun1|scaffold_198819 (68532-68636) | |
| 176-282, gnl|panTro1|chr20 (2103612-2103725) | |
| 176-282, gnl|rheMac2|chr19 (1825842-1825955) | |
| 176-282, gnl|rn3|chr7 (10554800-10554687) | |
| 176-282, gnl|tetNig1|chr1 (15274443-15274548) | |
| 176-282, gnl|xenTro1|scaffold_296 (680667-680563) | |
| 436-542, gnl|bosTau2|chr7 (18275666-18275772) | |
| 436-542, gnl|canFam2|chr20 (60113509-60113387) | |
| 436-542, gnl|danRer3|chr8 (11860507-11860619) | |
| 436-542, gnl|dasNov1|scaffold_10389 (19749-19874) | |
| 436-542, gnl|echTel1|scaffold_310246 (35604-35721) | |
| 436-542, gnl|fr1|chrUn (126804228-126804116) | |
| 436-542, gnl|galGal2|chr8 (22053388-22053498) | |
| 436-542, gnl|hg17|chr19 (1993753-1993878) | |
| 436-542, gnl|Hg17|chr19 (1993870-1993764) | |
| 436-542, gnl|loxAfr1|scaffold_4751 (17172-17293) | |
| 436-542, gnl|mm7|chr10 (80459005-80459116) | |
| 436-542, gnl|Mm7|chr10 (80459111-80459005) | |
| 436-542, gnl|monDom2|scaffold_75 (3665959-3666082) | |
| 436-542, gnl|oryCun1|scaffold_198819 (61678-61789) | |
| 436-542, gnl|panTro1|chr1_random (66836391-66836280) | |
| 436-542, gnl|rheMac2|chr19 (1821108-1821228) | |
| 436-542, gnl|rn3|chr7 (10556977-10556866) | |
| 436-542, gnl|tetNig1|chr1 (15272195-15272307) | |
| 436-542, gnl|xenTro1|scaffold_296 (682148-682028) | |
| 693-864, gnl|bosTau2|chr7 (18276535-18276706) | |
| 693-864, gnl|Hg17|chr19 (1993034-1992863) | |
| 693-864, gnl|Mm7|chr10 (80458425-80458254) |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 176-282, gnl|bosTau2|chr7 (18273073-18273179) | |
| 176-282, gnl|canFam2|chr20 (60110717-60110604) | |
| 176-282, gnl|danRer3|chr8 (11862880-11862983) | |
| 176-282, gnl|dasNov1|scaffold_301865 (678-790) | |
| 176-282, gnl|echTel1|scaffold_310246 (37461-37565) | |
| 176-282, gnl|fr1|chrUn (126802016-126801903) | |
| 176-282, gnl|hg17|chr19 (1997181-1997294) | |
| 176-282, gnl|Hg17|chr19 (1997287-1997185) | |
| 176-282, gnl|loxAfr1|scaffold_4751 (26139-26225) | |
| 176-282, gnl|mm7|chr10 (80461263-80461376) | |
| 176-282, gnl|Mm7|chr10 (80461372-80461267) | |
| 176-282, gnl|monDom2|scaffold_75 (3673199-3673312) | |
| 176-282, gnl|oryCun1|scaffold_198819 (68532-68636) | |
| 176-282, gnl|panTro1|chr20 (2103612-2103725) | |
| 176-282, gnl|rheMac2|chr19 (1825842-1825955) | |
| 176-282, gnl|rn3|chr7 (10554800-10554687) | |
| 176-282, gnl|tetNig1|chr1 (15274443-15274548) | |
| 176-282, gnl|xenTro1|scaffold_296 (680667-680563) | |
| 436-542, gnl|bosTau2|chr7 (18275666-18275772) | |
| 436-542, gnl|canFam2|chr20 (60113509-60113387) | |
| 436-542, gnl|danRer3|chr8 (11860507-11860619) | |
| 436-542, gnl|dasNov1|scaffold_10389 (19749-19874) | |
| 436-542, gnl|echTel1|scaffold_310246 (35604-35721) | |
| 436-542, gnl|fr1|chrUn (126804228-126804116) | |
| 436-542, gnl|galGal2|chr8 (22053388-22053498) | |
| 436-542, gnl|hg17|chr19 (1993753-1993878) | |
| 436-542, gnl|Hg17|chr19 (1993870-1993764) | |
| 436-542, gnl|loxAfr1|scaffold_4751 (17172-17293) | |
| 436-542, gnl|mm7|chr10 (80459005-80459116) | |
| 436-542, gnl|Mm7|chr10 (80459111-80459005) | |
| 436-542, gnl|monDom2|scaffold_75 (3665959-3666082) | |
| 436-542, gnl|oryCun1|scaffold_198819 (61678-61789) | |
| 436-542, gnl|panTro1|chr1_random (66836391-66836280) | |
| 436-542, gnl|rheMac2|chr19 (1821108-1821228) | |
| 436-542, gnl|rn3|chr7 (10556977-10556866) | |
| 436-542, gnl|tetNig1|chr1 (15272195-15272307) | |
| 436-542, gnl|xenTro1|scaffold_296 (682148-682028) | |
| 693-864, gnl|bosTau2|chr7 (18276535-18276706) | |
| 693-864, gnl|Hg17|chr19 (1993034-1992863) | |
| 693-864, gnl|Mm7|chr10 (80458425-80458254) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.116252) |