Non-Coding RNA Search

Ss1.1-rmed13c_g15.5

Sequence:


               
               AGGTAGCCCCGGGCTGGTCCCCGGAGCCTGGAGTCACTGACTGCTCCTTGGCCTCTCAGA
ACCTCTACGACAGCATCCGAAATGAGCCGTTCAAGATTCCCGAGGACGACGGCAACGACC
TGACTCACACCTTCTTCAACCCGGACCGGGAGGGCTGGCTCCTCAAGCTGGGTACGTCCC
CTCCTGACTCTGCCTCTGCAGGGCGGGAGGCTGCTGGGCCCCGGGCTCTGGACTCAGCTT
TCGCACCTGCCCACTGTGTGACCTTAGGCCAGTGATTTGACCTCTCTGAACCTCCAGTCT
CCACACCCAAAAAGACGATCAGGCCTGCCGGGCACACGTTCAGGGCCCACTAACCCCTTC
TGGCTGCCCGCCTATCCTTCAGGAAGCCCTCCCCTAGGCCAGGCCCTGTTCCAGCCCTGA
GGGCACAGTCGAGATGCCAGCAGCATGGTCCCCCTCTGGAGGAGGGTTCGCTCACGATGC
TCTCAGGGAGCAGAAAACAACCCAAGGGGCCAAGGCACCCAGGCGCCTCTTGGCTCACTT
GGCGGGGAATCAGGTTCCAGGCTAGACCCACTGGGAGACCATCGAGTCTGCCCTCACCGT
CTGCTGCCTCCTCATCAGCCCAGCAGCAAGGTGGNTGCTCCAGAGGTAGTGTACCTGCCC
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------GCTGCAGGTTCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGTAGCCCCGGGCTGGTCCCCGGAGCCTGGAGTCACTGACTGCTCCTTGGCCTCTCAGA
ACCTCTACGACAGCATCCGAAATGAGCCGTTCAAGATTCCCGAGGACGACGGCAACGACC
TGACTCACACCTTCTTCAACCCGGACCGGGAGGGCTGGCTCCTCAAGCTGGGTACGTCCC
CTCCTGACTCTGCCTCTGCAGGGCGGGAGGCTGCTGGGCCCCGGGCTCTGGACTCAGCTT
TCGCACCTGCCCACTGTGTGACCTTAGGCCAGTGATTTGACCTCTCTGAACCTCCAGTCT
CCACACCCAAAAAGACGATCAGGCCTGCCGGGCACACGTTCAGGGCCCACTAACCCCTTC
TGGCTGCCCGCCTATCCTTCAGGAAGCCCTCCCCTAGGCCAGGCCCTGTTCCAGCCCTGA
GGGCACAGTCGAGATGCCAGCAGCATGGTCCCCCTCTGGAGGAGGGTTCGCTCACGATGC
TCTCAGGGAGCAGAAAACAACCCAAGGGGCCAAGGCACCCAGGCGCCTCTTGGCTCACTT
GGCGGGGAATCAGGTTCCAGGCTAGACCCACTGGGAGACCATCGAGTCTGCCCTCACCGT
CTGCTGCCTCCTCATCAGCCCAGCAGCAAGGTGGNTGCTCCAGAGGTAGTGTACCTGCCC
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------GCTGCAGGTTCG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-314, gnl|bosTau2|chr18 (50346324-50346009)
               

               
               3-314, gnl|Hg17|chr19 (53669851-53670164)
               

               
               3-314, gnl|Mm7|chr7 (41986516-41986245)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-314, gnl|bosTau2|chr18 (50346324-50346009)
               

               
               3-314, gnl|Hg17|chr19 (53669851-53670164)
               

               
               3-314, gnl|Mm7|chr7 (41986516-41986245)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	3-314, gnl\|bosTau2\|chr18 (50346324-50346009)
	3-314, gnl\|Hg17\|chr19 (53669851-53670164)
	3-314, gnl\|Mm7\|chr7 (41986516-41986245)