Ss1.1-rmed13c_i6.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCCTTAAAACCAAGCACATTGCTCACTGGTGTCGCTGCCACGGCTACACCCCACCTGAC CCTGAGAGCCTGAGGAGTGAAGGGGATTCAATTGAGGATGTGCTGACCCAGATCGACAGT GAGCCCGAGTGCCCATCATCATTCTCCTCTGCTGACAACCTCTGCCGGAAACTGGAAGAC CTGCAGCAGTTTCAGAAGAGCGAGCCGGAGAATGAGGAGGAAGTGGACATCCTCAGCCTC TCGGAGCCACTAAAGATAAACATCAAAAAGGAACAGGAAGAGAAACAGGAAGAAATGAAA TTCTACCTGCCACCAACGCCAGGCTCTGAATTTATTGGTGACATCACACAGAAGATTGGA ATCACCTTGCAGCCTGTGGCACTTCACAGGAATGTGTATGCGTCGGTGGTGGAGGACATG ATTTTAAAGGCGACGGAGCAGCTGGTCAGTGACATCCTGAGACAGGCTTTGGCGGTTGGA TACCAGGCAGCATCTCACAACAGGATTCCCAAAGAAATTACAGTGAGTAATATTCACCAG GCCATTTGTAACATTCCTTTTCTGGACTTCCTCACAAATAAACATATGGGGATTCTGAAT GAAGATCAATGAATGGAACGAAGAAGGCCCTAGGAAAGCAGGATTCAAAGCCTCGAACTG TGATGACTCTTCTGTTTGGGAGAGCAGGTCATTCTCTGTGCGTCAGAATATCATGGCCAC CAAGCTGTTGGCTCCACCTAACACCACCAGAGCGTCAGTCCCAGGTCAGATCCCTTTAAG ACAGAAGTCTGTTTCCTGATTGCAGCGTGAAGACGAGAGTGGGTGCATGCTCTGGCAGCT GGCTTTTGTTCACCGTGCACACTCCGTCAGTCTCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCCTTAAAACCAAGCACATTGCTCACTGGTGTCGCTGCCACGGCTACACCCCACCTGAC CCTGAGAGCCTGAGGAGTGAAGGGGATTCAATTGAGGATGTGCTGACCCAGATCGACAGT GAGCCCGAGTGCCCATCATCATTCTCCTCTGCTGACAACCTCTGCCGGAAACTGGAAGAC CTGCAGCAGTTTCAGAAGAGCGAGCCGGAGAATGAGGAGGAAGTGGACATCCTCAGCCTC TCGGAGCCACTAAAGATAAACATCAAAAAGGAACAGGAAGAGAAACAGGAAGAAATGAAA TTCTACCTGCCACCAACGCCAGGCTCTGAATTTATTGGTGACATCACACAGAAGATTGGA ATCACCTTGCAGCCTGTGGCACTTCACAGGAATGTGTATGCGTCGGTGGTGGAGGACATG ATTTTAAAGGCGACGGAGCAGCTGGTCAGTGACATCCTGAGACAGGCTTTGGCGGTTGGA TACCAGGCAGCATCTCACAACAGGATTCCCAAAGAAATTACAGTGAGTAATATTCACCAG GCCATTTGTAACATTCCTTTTCTGGACTTCCTCACAAATAAACATATGGGGATTCTGAAT GAAGATCAATGAATGGAACGAAGAAGGCCCTAGGAAAGCAGGATTCAAAGCCTCGAACTG TGATGACTCTTCTGTTTGGGAGAGCAGGTCATTCTCTGTGCGTCAGAATATCATGGCCAC CAAGCTGTTGGCTCCACCTAACACCACCAGAGCGTCAGTCCCAGGTCAGATCCCTTTAAG ACAGAAGTCTGTTTCCTGATTGCAGCGTGAAGACGAGAGTGGGTGCATGCTCTGGCAGCT GGCTTTTGTTCACCGTGCACACTCCGTCAGTCTCAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 1-125, gnl|bosTau2|chr1 (51934963-51935087) | |
| 1-125, gnl|canFam2|chr34 (19778140-19778287) | |
| 1-125, gnl|danRer3|chr19 (7566828-7566966) | |
| 1-125, gnl|echTel1|scaffold_279730 (1877-1730) | |
| 1-125, gnl|fr1|chrUn (154322228-154322075) | |
| 1-125, gnl|galGal2|chr9 (2057652-2057799) | |
| 1-125, gnl|hg17|chr3 (185004546-185004693) | |
| 1-125, gnl|Hg17|chr3 (185004552-185004676) | |
| 1-125, gnl|loxAfr1|scaffold_9096 (15836-15982) | |
| 1-125, gnl|mm7|chr16 (19772830-19772977) | |
| 1-125, gnl|Mm7|chr16 (19772836-19772960) | |
| 1-125, gnl|monDom2|scaffold_77 (1941399-1941546) | |
| 1-125, gnl|oryCun1|scaffold_66586 (1986-1839) | |
| 1-125, gnl|panTro1|chr2 (188949176-188949323) | |
| 1-125, gnl|rheMac2|chr2 (102865201-102865054) | |
| 1-125, gnl|rn3|chr11 (83054977-83054827) | |
| 1-125, gnl|tetNig1|chr15 (5136365-5136224) | |
| 1-125, gnl|xenTro1|scaffold_382 (19794-19653) | |
| 127-359, gnl|bosTau2|chr1 (51936708-51936940) | |
| 127-359, gnl|Hg17|chr3 (185007355-185007587) | |
| 127-359, gnl|Mm7|chr16 (19777733-19777965) | |
| 501-853, gnl|bosTau2|chr1 (51939858-51940212) | |
| 501-853, gnl|Hg17|chr3 (185010962-185011329) | |
| 501-853, gnl|Mm7|chr16 (19780783-19781142) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-125, gnl|bosTau2|chr1 (51934963-51935087) | |
| 1-125, gnl|canFam2|chr34 (19778140-19778287) | |
| 1-125, gnl|danRer3|chr19 (7566828-7566966) | |
| 1-125, gnl|echTel1|scaffold_279730 (1877-1730) | |
| 1-125, gnl|fr1|chrUn (154322228-154322075) | |
| 1-125, gnl|galGal2|chr9 (2057652-2057799) | |
| 1-125, gnl|hg17|chr3 (185004546-185004693) | |
| 1-125, gnl|Hg17|chr3 (185004552-185004676) | |
| 1-125, gnl|loxAfr1|scaffold_9096 (15836-15982) | |
| 1-125, gnl|mm7|chr16 (19772830-19772977) | |
| 1-125, gnl|Mm7|chr16 (19772836-19772960) | |
| 1-125, gnl|monDom2|scaffold_77 (1941399-1941546) | |
| 1-125, gnl|oryCun1|scaffold_66586 (1986-1839) | |
| 1-125, gnl|panTro1|chr2 (188949176-188949323) | |
| 1-125, gnl|rheMac2|chr2 (102865201-102865054) | |
| 1-125, gnl|rn3|chr11 (83054977-83054827) | |
| 1-125, gnl|tetNig1|chr15 (5136365-5136224) | |
| 1-125, gnl|xenTro1|scaffold_382 (19794-19653) | |
| 127-359, gnl|bosTau2|chr1 (51936708-51936940) | |
| 127-359, gnl|Hg17|chr3 (185007355-185007587) | |
| 127-359, gnl|Mm7|chr16 (19777733-19777965) | |
| 501-853, gnl|bosTau2|chr1 (51939858-51940212) | |
| 501-853, gnl|Hg17|chr3 (185010962-185011329) | |
| 501-853, gnl|Mm7|chr16 (19780783-19781142) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) | |
| eep (0.122564) | |
| med (0.116252) |