Non-Coding RNA Search

Ss1.1-rmed14c_c21.5S

Sequence:


               
               TGGTTTTGCTGATTGTAGAAGATCTTGGTAAAGCGAATGGGCATGTTAGGGACAGTGACC
CGAGTCTCCAGGCCCACACTGAATGCTGAACGGTAGACATAGGCGCTTTCTCCAGGTTCT
CCTTTTCTGCCCGGGATTCCTGGGAAACCTCGGGGACCTTCAACCCCAGTCACTCCAGAT
TCCCCAGTGTCACCCTTAGGACCAGTAAGACCTGTATCTCCTTTCTCACCCTTCTCGCCA
GGGACGCCATCTCTGCCATCACGGCCTGGGGTACCGTTGTGGCCAGGATGCCCTGGGATA
CCCGCCATCCAGCCTGCGCAGGCCCCCTTGGGCATGGGCAGTAGTGCTCCAGGCTTCTCG
GTGGTTTCCTGGCCGAGACTGGGCAGGGCTAGTAGCAGTAGAACAGCTCCCAACAACAGC
ATCCTGAGCCCCTCAGGTGTGGAATCAGAGCCACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGTTTTGCTGATTGTAGAAGATCTTGGTAAAGCGAATGGGCATGTTAGGGACAGTGACC
CGAGTCTCCAGGCCCACACTGAATGCTGAACGGTAGACATAGGCGCTTTCTCCAGGTTCT
CCTTTTCTGCCCGGGATTCCTGGGAAACCTCGGGGACCTTCAACCCCAGTCACTCCAGAT
TCCCCAGTGTCACCCTTAGGACCAGTAAGACCTGTATCTCCTTTCTCACCCTTCTCGCCA
GGGACGCCATCTCTGCCATCACGGCCTGGGGTACCGTTGTGGCCAGGATGCCCTGGGATA
CCCGCCATCCAGCCTGCGCAGGCCCCCTTGGGCATGGGCAGTAGTGCTCCAGGCTTCTCG
GTGGTTTCCTGGCCGAGACTGGGCAGGGCTAGTAGCAGTAGAACAGCTCCCAACAACAGC
ATCCTGAGCCCCTCAGGTGTGGAATCAGAGCCACAG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|33694199|gb|AAQ24844.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|33694199|gb|AAQ24844.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-213, gnl|bosTau2|chr1 (49582815-49582603)
               

               
               1-213, gnl|Hg17|chr3 (188054885-188054673)
               

               
               1-213, gnl|Mm7|chr16 (22815906-22815694)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-213, gnl|bosTau2|chr1 (49582815-49582603)
               

               
               1-213, gnl|Hg17|chr3 (188054885-188054673)
               

               
               1-213, gnl|Mm7|chr16 (22815906-22815694)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               med (0.116252)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)
               

               
               cty (0.10408)

	1-213, gnl\|bosTau2\|chr1 (49582815-49582603)
	1-213, gnl\|Hg17\|chr3 (188054885-188054673)
	1-213, gnl\|Mm7\|chr16 (22815906-22815694)