Ss1.1-rmed15c_f16.5
|
ATGGGGCTGAGCAGACGTTGCCCACACTGGGCCTCACCAATAACCAGCTCTTCTTCCTGG
GCTTTGCACAGGTCTGGTGCTCTGTCCGCACACCTGAGAGCTCCCACGAAGGCCTCATCA
CCGATCCCCACAGCCCCTCCCGCTTCCGGGTCATCGGCTCCATCTCCAACTCCAAGGAGT
TCTCGGAACACTTCCACTGCCCACCCGGCTCGCCCATGAACCCTCATCACAAGTGTGAAG
TCTGGTGAGGGGCCAAGCGCCAGAGGCCGAGACGGAGGAAGAGGGGGAGGGACTGAGGAT
GAGCCCCCAGGGTGGGGCCCGCCAGGCTGCCCCCTCCATCCAGCGTCCAGGGCGTCGCCC
AGCCCCCTTGGCCACCTCCGGCCCCCTTCCCTGCACTGGAGGGTTTTCAGCTGGAACCAA
GCCTGTGATGCGGGTTCTCACCGTCGTCCGAGATTCGATCCCTTGTGAAGACCCTGTGGG
CCCAGGCTCATGTGTGTCAACTCTGTCGAGCATTTGGGTGTCAGGCTGGTGGCTCACCAG
GCCTGGGCCCCACAAGGGCAGGGGACATGGCCCTCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATGGGGCTGAGCAGACGTTGCCCACACTGGGCCTCACCAATAACCAGCTCTTCTTCCTGG
GCTTTGCACAGGTCTGGTGCTCTGTCCGCACACCTGAGAGCTCCCACGAAGGCCTCATCA
CCGATCCCCACAGCCCCTCCCGCTTCCGGGTCATCGGCTCCATCTCCAACTCCAAGGAGT
TCTCGGAACACTTCCACTGCCCACCCGGCTCGCCCATGAACCCTCATCACAAGTGTGAAG
TCTGGTGAGGGGCCAAGCGCCAGAGGCCGAGACGGAGGAAGAGGGGGAGGGACTGAGGAT
GAGCCCCCAGGGTGGGGCCCGCCAGGCTGCCCCCTCCATCCAGCGTCCAGGGCGTCGCCC
AGCCCCCTTGGCCACCTCCGGCCCCCTTCCCTGCACTGGAGGGTTTTCAGCTGGAACCAA
GCCTGTGATGCGGGTTCTCACCGTCGTCCGAGATTCGATCCCTTGTGAAGACCCTGTGGG
CCCAGGCTCATGTGTGTCAACTCTGTCGAGCATTTGGGTGTCAGGCTGGTGGCTCACCAG
GCCTGGGCCCCACAAGGGCAGGGGACATGGCCCTCC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
67-350, gnl|bosTau2|chr2 (85169027-85169307) |
|
67-350, gnl|Hg17|chr1 (21291935-21291648) |
|
67-350, gnl|Mm7|chr4 (137341158-137341448) |
| |
|
378-565, gnl|bosTau2|chr2 (85169304-85169497) |
|
378-565, gnl|canFam2|chr2 (80686313-80685991) |
|
378-565, gnl|echTel1|scaffold_60594 (1199-1513) |
|
378-565, gnl|galGal2|chrUn (86275838-86276247) |
|
378-565, gnl|hg17|chr1 (21291401-21291693) |
|
378-565, gnl|Hg17|chr1 (21291651-21291471) |
|
378-565, gnl|loxAfr1|scaffold_19914 (53388-53070) |
|
378-565, gnl|mm7|chr4 (137341735-137341426) |
|
378-565, gnl|Mm7|chr4 (137341442-137341642) |
|
378-565, gnl|monDom2|scaffold_90 (2704788-2705117) |
|
378-565, gnl|oryCun1|scaffold_108339 (3180-3437) |
|
378-565, gnl|panTro1|chr1 (21614071-21614361) |
|
378-565, gnl|rheMac2|chr1 (23885332-23885622) |
|
378-565, gnl|rn3|chr5 (156745757-156745447) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
67-350, gnl|bosTau2|chr2 (85169027-85169307) |
|
67-350, gnl|Hg17|chr1 (21291935-21291648) |
|
67-350, gnl|Mm7|chr4 (137341158-137341448) |
| |
|
378-565, gnl|bosTau2|chr2 (85169304-85169497) |
|
378-565, gnl|canFam2|chr2 (80686313-80685991) |
|
378-565, gnl|echTel1|scaffold_60594 (1199-1513) |
|
378-565, gnl|galGal2|chrUn (86275838-86276247) |
|
378-565, gnl|hg17|chr1 (21291401-21291693) |
|
378-565, gnl|Hg17|chr1 (21291651-21291471) |
|
378-565, gnl|loxAfr1|scaffold_19914 (53388-53070) |
|
378-565, gnl|mm7|chr4 (137341735-137341426) |
|
378-565, gnl|Mm7|chr4 (137341442-137341642) |
|
378-565, gnl|monDom2|scaffold_90 (2704788-2705117) |
|
378-565, gnl|oryCun1|scaffold_108339 (3180-3437) |
|
378-565, gnl|panTro1|chr1 (21614071-21614361) |
|
378-565, gnl|rheMac2|chr1 (23885332-23885622) |
|
378-565, gnl|rn3|chr5 (156745757-156745447) |
|
cag (0.151194) |
|
med (0.116252) |
|
cag (0.151194) |
|
med (0.116252) |
