Non-Coding RNA Search

Ss1.1-rmed15c_h11.5

Sequence:


               
               CCGCCTGAAGTAACAGAGCTAGGAAGCATAGAGCAAGGATTCTAGCCCACCTCTGTCTGA
CTCTGGTGCAGTTTCTCTATTTTTATTCAACATTACCTCCTACTGAGGGTGAAAGGGGTT
GCAAGGAGGTAAGTACAGCAGAGGGGAAAGACACAAGAAAGCCAAAAAAGAAGGCAACAC
AGCAACATCAGTGAGTCATGCCATTCCTGTGTAGACCAGTTGGCAGCAAAGCCCTCCAAC
TTGGAATAGGATCTGTTTTTCCTCATCTGTATCCTCACCTTCATCAGAGTTAATGACTTT
GAAGCTACTAAAGGAGTAATTAACCCTTTGATTCACTCAACCTACCAGAGTTGTATTGCT
TGAAGCCAATTATAGATGGGCTTCAAAGCAGCTTTAAAAGATTGTCCTGCAGAAATTTAA
ATGCTTCCTTTAATTATTTTTCCAACTTTGAGCAAGCTGCAGTCTTCTTGGACACTTTGT
GGGAAGGGTATTCCCTGATGTAAGAGAGATTTAATTTTTCTACAGTGTTCAGATAAAACT
CTTAGGGAGAGTATTGGATGGTGTTGAAATCAGCTCTTTCTAAATCATGTGATATTTTGA
CCGGCTAGAGATGCAGATGCATAACTTCTAACTATAATTATTGTGAGACTGGGAGCCTCA
AGATAAAACTATCATTCAGAAGATGTTATTACTCAACTTATCCAAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGCCTGAAGTAACAGAGCTAGGAAGCATAGAGCAAGGATTCTAGCCCACCTCTGTCTGA
CTCTGGTGCAGTTTCTCTATTTTTATTCAACATTACCTCCTACTGAGGGTGAAAGGGGTT
GCAAGGAGGTAAGTACAGCAGAGGGGAAAGACACAAGAAAGCCAAAAAAGAAGGCAACAC
AGCAACATCAGTGAGTCATGCCATTCCTGTGTAGACCAGTTGGCAGCAAAGCCCTCCAAC
TTGGAATAGGATCTGTTTTTCCTCATCTGTATCCTCACCTTCATCAGAGTTAATGACTTT
GAAGCTACTAAAGGAGTAATTAACCCTTTGATTCACTCAACCTACCAGAGTTGTATTGCT
TGAAGCCAATTATAGATGGGCTTCAAAGCAGCTTTAAAAGATTGTCCTGCAGAAATTTAA
ATGCTTCCTTTAATTATTTTTCCAACTTTGAGCAAGCTGCAGTCTTCTTGGACACTTTGT
GGGAAGGGTATTCCCTGATGTAAGAGAGATTTAATTTTTCTACAGTGTTCAGATAAAACT
CTTAGGGAGAGTATTGGATGGTGTTGAAATCAGCTCTTTCTAAATCATGTGATATTTTGA
CCGGCTAGAGATGCAGATGCATAACTTCTAACTATAATTATTGTGAGACTGGGAGCCTCA
AGATAAAACTATCATTCAGAAGATGTTATTACTCAACTTATCCAAAAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-707, gnl|bosTau2|chr7 (48165812-48165119)
               

               
               3-707, gnl|Hg17|chr5 (156613604-156614248)
               

               
               3-707, gnl|Mm7|chr11 (46283015-46282385)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-707, gnl|bosTau2|chr7 (48165812-48165119)
               

               
               3-707, gnl|Hg17|chr5 (156613604-156614248)
               

               
               3-707, gnl|Mm7|chr11 (46283015-46282385)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               liv (0.438853)
               

               
               thg (0.253582)
               

               
               spl (0.143184)
               

               
               med (0.116252)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.438853)
               

               
               thg (0.253582)
               

               
               spl (0.143184)
               

               
               med (0.116252)

	3-707, gnl\|bosTau2\|chr7 (48165812-48165119)
	3-707, gnl\|Hg17\|chr5 (156613604-156614248)
	3-707, gnl\|Mm7\|chr11 (46283015-46282385)